chr3 : 102,078,976 – 102,079,181
205 bp 67 TFs 0 linked genes
This 205 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:102,073,976 – 102,084,181
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 205 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 205 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 205 bp overlap
ATF6 2 datasets
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Motif ES_0h ES_0h-ATF6_MA1466.2 13 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 124 bp overlap
BRD4 12 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 203 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 125 bp overlap
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 205 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 203 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 205 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 205 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 205 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 205 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 136 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 205 bp overlap
ChIP T-cell_iBET-BD1 GSE138084.BRD4.T-cell_iBET-BD1 171 bp overlap
ChIP T-cell_iBET-BD2 GSE138084.BRD4.T-cell_iBET-BD2 179 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 182 bp overlap
CDK9 2 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 163 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 146 bp overlap
CREB3L1 2 datasets
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
Motif ES_0h ES_0h-CREB3L1_MA0839.2 13 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 205 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 205 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 205 bp overlap
EP300 1 dataset
ChIP upper lobe of left lung ENCFF024QBJ 205 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 112 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 178 bp overlap
ChIP LAPC-4_CST_DHT GSE123618.FOXA1.LAPC-4_CST_DHT 70 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 205 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 101 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 85 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 52 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 165 bp overlap
GATA6 2 datasets
ChIP PATU8988 GSE47535.GATA6.PATU8988 133 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 118 bp overlap
HOXB13 1 dataset
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 203 bp overlap
MAF 1 dataset
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 205 bp overlap
MAX 3 datasets
ChIP P493-6 GSE36354.MAX.P493-6 205 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 166 bp overlap
ChIP P493-6_CMYC_24H GSE36354.MAX.P493-6_CMYC_24H 180 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 110 bp overlap
MED1 2 datasets
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 205 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 139 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYB 2 datasets
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 199 bp overlap
ChIP DU528 GSE94000.MYB.DU528 205 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 162 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 205 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 171 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 204 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 205 bp overlap
NKX2-3 2 datasets
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 2 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 2 datasets
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
PAXIP1 1 dataset
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 194 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 205 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 139 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RELA 1 dataset
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 127 bp overlap
RUNX1 2 datasets
ChIP SKH1 GSE87283.RUNX1.SKH1 124 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 205 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 205 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 205 bp overlap
SOX10 3 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 205 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 205 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 184 bp overlap
SPI1 1 dataset
ChIP GM12891 ENCFF563IUT 149 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 205 bp overlap
STAT3 6 datasets
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 77 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 77 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 58 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 205 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 149 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 158 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 172 bp overlap
Sox11 3 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Spi1 3 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TBP 1 dataset
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 102 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 56 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 205 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF16 2 datasets
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF213 2 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF263 6 datasets
ChIP HEK293 ENCFF336CWQ 205 bp overlap
ChIP HEK293 ENCFF336CWQ 150 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 205 bp overlap
ChIP HepG2 ENCFF626SSV 205 bp overlap
ChIP WTC11 ENCFF893RTM 205 bp overlap
ChIP WTC11 ENCFF893RTM 74 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 139 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF682 2 datasets
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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