chr3 : 37,302,030 – 37,302,269

239 bp 88 TFs 0 linked genes

This 239 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

88 transcription factors

AR 1 dataset

ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 175 bp overlap

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 180 bp overlap

Atf3 1 dataset

Motif ES_0h ES_0h-Atf3_MA1988.2 7 bp overlap

BACH1 1 dataset

Motif ES_0h ES_0h-BACH1_MA1633.2 9 bp overlap

BACH2 1 dataset

Motif ES_0h ES_0h-BACH2_MA1101.3 11 bp overlap

BATF 2 datasets

Motif ES_0h ES_0h-BATF_MA1634.2 7 bp overlap

ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 151 bp overlap

BATF3 1 dataset

Motif ES_0h ES_0h-BATF3_MA0835.3 7 bp overlap

BATF::JUN 1 dataset

Motif ES_0h ES_0h-BATFJUN_MA0462.3 7 bp overlap

BNC2 1 dataset

Motif ES_0h ES_0h-BNC2_MA1928.2 7 bp overlap

BRD4 2 datasets

ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 66 bp overlap

ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 153 bp overlap

Bach1::Mafk 1 dataset

Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap

CDK8 2 datasets

ChIP monocyte_IFNg-LPS GSE120943.CDK8.monocyte_IFNg-LPS 149 bp overlap

ChIP monocyte_LPS GSE120943.CDK8.monocyte_LPS 137 bp overlap

CDK9 1 dataset

ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 144 bp overlap

CEBPA 6 datasets

ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 136 bp overlap

ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 191 bp overlap

ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 198 bp overlap

ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 202 bp overlap

ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 154 bp overlap

ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 185 bp overlap

CEBPB 8 datasets

ChIP THP-1_NS1-Pam3csk-0h GSE103477.CEBPB.THP-1_NS1-Pam3csk-0h 162 bp overlap

ChIP THP-1_NS1-Pam3csk-4h GSE103477.CEBPB.THP-1_NS1-Pam3csk-4h 139 bp overlap

ChIP THP-1_eGFP-Pam3csk-0h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-0h 139 bp overlap

ChIP THP-1_eGFP-Pam3csk-4h GSE103477.CEBPB.THP-1_eGFP-Pam3csk-4h 191 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 187 bp overlap

ChIP monocyte GSE98367.CEBPB.monocyte 139 bp overlap

ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 214 bp overlap

ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 175 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 227 bp overlap

CREB1 3 datasets

ChIP GM23338 ENCFF432ZEW 239 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 224 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 141 bp overlap

CREBBP 3 datasets

ChIP monocyte_IFNg GSE131294.CREBBP.monocyte_IFNg 72 bp overlap

ChIP monocyte_IFNg-LPS GSE131294.CREBBP.monocyte_IFNg-LPS 197 bp overlap

ChIP monocyte_LPS GSE131294.CREBBP.monocyte_LPS 159 bp overlap

Crx 1 dataset

Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap

FOS 1 dataset

Motif ES_0h ES_0h-FOS_MA0476.2 8 bp overlap

FOS::JUN 1 dataset

Motif ES_0h ES_0h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 1 dataset

Motif ES_0h ES_0h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 1 dataset

Motif ES_0h ES_0h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 1 dataset

Motif ES_0h ES_0h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 1 dataset

Motif ES_0h ES_0h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif ES_0h ES_0h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif ES_0h ES_0h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif ES_0h ES_0h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 1 dataset

Motif ES_0h ES_0h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 1 dataset

Motif ES_0h ES_0h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 1 dataset

Motif ES_0h ES_0h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 1 dataset

Motif ES_0h ES_0h-FOSL2JUND_MA1144.2 9 bp overlap

GLYR1 1 dataset

ChIP HeLa GSE20303.GLYR1.HeLa 207 bp overlap

GSC 1 dataset

Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap

GSC2 1 dataset

Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 150 bp overlap

IRF1 1 dataset

ChIP CD14_LPS GSE43036.IRF1.CD14_LPS 232 bp overlap

IRF4 2 datasets

ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 99 bp overlap

ChIP OCI-Ly3 GSE56857.IRF4.OCI-Ly3 214 bp overlap

JDP2 1 dataset

Motif ES_0h ES_0h-JDP2_MA0655.1 9 bp overlap

JMJD1C 1 dataset

ChIP THP-1 GSE63484.JMJD1C.THP-1 63 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 239 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 239 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 239 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 239 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 239 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 239 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 239 bp overlap

JUN::JUNB 1 dataset

Motif ES_0h ES_0h-JUNJUNB_MA1132.2 8 bp overlap

JUNB 1 dataset

Motif ES_0h ES_0h-JUNB_MA0490.3 9 bp overlap

JUND 4 datasets

Motif ES_0h ES_0h-JUND_MA0491.3 9 bp overlap

ChIP H1 ENCFF010YXS 224 bp overlap

ChIP WA01 ENCSR000EBZ.JUND.WA01 234 bp overlap

ChIP WA01 ENCSR000BKP.JUND.WA01 203 bp overlap

Jun 1 dataset

Motif ES_0h ES_0h-Jun_MA0489.3 8 bp overlap

MAF::NFE2 1 dataset

Motif ES_0h ES_0h-MAFNFE2_MA0501.2 11 bp overlap

MAFG::NFE2L1 1 dataset

Motif ES_0h ES_0h-MAFGNFE2L1_MA0089.3 11 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 117 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 224 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 239 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 239 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 203 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 239 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 233 bp overlap

ChIP hESC GSE20650.NANOG.hESC 210 bp overlap

ChIP hESC GSE18292.NANOG.hESC 198 bp overlap

NFE2 1 dataset

Motif ES_0h ES_0h-NFE2_MA0841.2 10 bp overlap

NR2F2 1 dataset

ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 52 bp overlap

Nfe2l2 1 dataset

Motif ES_0h ES_0h-Nfe2l2_MA0150.3 11 bp overlap

OTX1 1 dataset

Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap

OTX2 2 datasets

Motif ES_0h ES_0h-OTX2_MA0712.3 7 bp overlap

ChIP WTC11 ENCFF634NAO 168 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 187 bp overlap

PITX1 1 dataset

Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap

PITX2 1 dataset

Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap

PITX3 1 dataset

Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap

PLAG1 1 dataset

Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap

POU1F1 1 dataset

Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap

POU2F2 1 dataset

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU3F2 1 dataset

ChIP hiPSC_SGC0946 GSE149017.POU3F2.hiPSC_SGC0946 174 bp overlap

POU5F1 13 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 239 bp overlap

ChIP GM23338 ENCFF333SNB 239 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 239 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 223 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 239 bp overlap

ChIP OSKM GSE81899.POU5F1.OSKM 159 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 186 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 122 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 239 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 239 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 214 bp overlap

ChIP hiPSC GSE149017.POU5F1.hiPSC 169 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 184 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 234 bp overlap

PPARG 1 dataset

Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap

RAD21 1 dataset

ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 53 bp overlap

RBPJ 1 dataset

ChIP GIC GSE79734.RBPJ.GIC 158 bp overlap

REST 1 dataset

ChIP hippocampus GSE144226.REST.hippocampus 141 bp overlap

RHOXF1 1 dataset

Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap

RUNX1 1 dataset

ChIP THP-1 GSE79899.RUNX1.THP-1 102 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 173 bp overlap

SMARCA4 3 datasets

ChIP NSC GSE125033.SMARCA4.NSC 198 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 239 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 239 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 239 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 239 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 239 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 225 bp overlap

SMC1 1 dataset

ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 91 bp overlap

SOX2 6 datasets

ChIP H9 GSE46837.SOX2.H9 171 bp overlap

ChIP HNSC GSE69479.SOX2.HNSC 215 bp overlap

ChIP OSKM GSE81899.SOX2.OSKM 175 bp overlap

ChIP hESC GSE69479.SOX2.hESC 185 bp overlap

ChIP hESC GSE18292.SOX2.hESC 133 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 239 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 109 bp overlap

SP5 1 dataset

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

SPI1 2 datasets

ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 158 bp overlap

ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 132 bp overlap

SREBP2 2 datasets

ChIP monocyte GSE129202.SREBP2.monocyte 190 bp overlap

ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 239 bp overlap

STAT1 3 datasets

ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 111 bp overlap

ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 239 bp overlap

ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 233 bp overlap

STAT3 5 datasets

ChIP OCI-Ly3 GSE50723.STAT3.OCI-Ly3 140 bp overlap

ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 83 bp overlap

ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 225 bp overlap

ChIP monocyte_IL10 GSE120943.STAT3.monocyte_IL10 215 bp overlap

ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 210 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 68 bp overlap

ZFP14 1 dataset

Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap

ZNF135 1 dataset

Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap

ZNF324 1 dataset

Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap

ZNF460 1 dataset

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap