chr1 : 55,064,105 – 55,064,501
396 bp 68 TFs 0 linked genes
This 396 bp open chromatin element has no linked target genes and is bound by 68 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:55,059,105 – 55,069,501
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 303 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 268 bp overlap
ChIP prostate GSE56288.AR.prostate 118 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 92 bp overlap
BACH2 1 dataset
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 362 bp overlap
BCL6 2 datasets
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 322 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 167 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 87 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 277 bp overlap
BRD4 3 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 233 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 170 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 183 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 204 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 341 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 209 bp overlap
CTCF 305 datasets
ChIP 22Rv1 ENCFF466OXN 230 bp overlap
ChIP 22Rv1 ENCFF466OXN 176 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 396 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 353 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 396 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 396 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 165 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 139 bp overlap
ChIP A2780cis GSE143691.CTCF.A2780cis 105 bp overlap
ChIP A549 ENCFF034FVO 245 bp overlap
ChIP AG04450 ENCFF116DJL 208 bp overlap
ChIP B cell ENCFF500PZO 316 bp overlap
ChIP B cell ENCFF506FKC 310 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 291 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 137 bp overlap
ChIP BJ ENCFF434HEC 304 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 212 bp overlap
ChIP D721Med ENCFF513FYD 184 bp overlap
ChIP DND-41 ENCFF913MRA 212 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 120 bp overlap
ChIP DU145 GSE121021.CTCF.DU145 224 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 207 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 229 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 396 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 297 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 396 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 167 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 166 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 162 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 325 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 254 bp overlap
ChIP GM12865 ENCFF067GFI 199 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 164 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 179 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 170 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 193 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 115 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 162 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 196 bp overlap
ChIP GM12873 ENCFF711LOS 222 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 143 bp overlap
ChIP GM12874 ENCFF942MTD 199 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 246 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 92 bp overlap
ChIP GM12875 ENCFF081UCQ 194 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 202 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 259 bp overlap
ChIP GM20000 ENCFF217HWJ 147 bp overlap
ChIP GM20000 ENCFF218HKS 147 bp overlap
ChIP GM20000 ENCSR000DLG.CTCF.GM20000 132 bp overlap
ChIP GM23338 ENCFF531QOI 262 bp overlap
ChIP GM23338 ENCFF531QOI 267 bp overlap
ChIP GM23338 ENCFF772DML 146 bp overlap
ChIP GM23338 ENCFF832KWE 330 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 292 bp overlap
ChIP H1 ENCFF230QSV 145 bp overlap
ChIP H9 ENCFF152GTF 249 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 227 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 121 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 227 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 173 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 166 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 341 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 396 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 365 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 226 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 280 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 264 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 228 bp overlap
ChIP HCT116 ENCFF003KHP 155 bp overlap
ChIP HCT116 ENCFF209YMI 192 bp overlap
ChIP HCT116 ENCFF373YMA 250 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 138 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 170 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 64 bp overlap
ChIP HEK293 ENCFF498RMM 177 bp overlap
ChIP HEK293 ENCFF821TIC 116 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 384 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 169 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 331 bp overlap
ChIP HFF-Myc ENCFF680WYR 234 bp overlap
ChIP HFFc6 ENCFF005CJI 250 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 123 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 189 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 274 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 326 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 232 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 191 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 199 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 129 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 187 bp overlap
ChIP HeLa-S3 ENCFF565UFR 138 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 208 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 115 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 276 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 210 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 222 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 165 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 144 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 203 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 200 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 132 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF127KUP 175 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 270 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 100 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 203 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 106 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 141 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 170 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 94 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 114 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 141 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 97 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 106 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 308 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 116 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 315 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 114 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 161 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 242 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 339 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 217 bp overlap
ChIP LNCAP ENCFF223HIG 293 bp overlap
ChIP LNCAP ENCFF700QXT 290 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 244 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 129 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 139 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 139 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 313 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 161 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 250 bp overlap
ChIP Loucy ENCFF359TVQ 157 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 336 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 186 bp overlap
ChIP MCF-7 ENCFF139NQI 171 bp overlap
ChIP MCF-7 ENCFF198DQX 181 bp overlap
ChIP MCF-7 ENCFF210JUZ 304 bp overlap
ChIP MCF-7 ENCFF414SZG 145 bp overlap
ChIP MCF-7 ENCFF424NQR 119 bp overlap
ChIP MCF-7 ENCFF494VXA 181 bp overlap
ChIP MCF-7 ENCFF844STM 115 bp overlap
ChIP MCF-7 ENCFF954TUV 55 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 131 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 195 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 124 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 158 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 271 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 222 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 229 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 264 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 162 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 295 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 228 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 396 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 201 bp overlap
ChIP MM.1S ENCFF869JMQ 153 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 396 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 300 bp overlap
ChIP NB4 ENCFF155DNY 185 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 165 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 396 bp overlap
ChIP NCI-H929 ENCFF305JAB 235 bp overlap
ChIP NCI-H929 ENCFF305JAB 334 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 396 bp overlap
ChIP OCI-LY1 ENCFF455ESK 181 bp overlap
ChIP OCI-LY1 ENCFF455ESK 361 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 262 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 275 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 396 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 396 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 181 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 298 bp overlap
ChIP PC-3 ENCFF487TUI 307 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 307 bp overlap
ChIP Panc1 ENCFF056JQX 371 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 182 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 396 bp overlap
ChIP RWPE2 ENCFF911IEE 280 bp overlap
ChIP SEM GSE117864.CTCF.SEM 338 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 141 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 199 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 219 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 396 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 396 bp overlap
ChIP TALL-1_Pat2 GSE130140.CTCF.TALL-1_Pat2 138 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 129 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 149 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 170 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 158 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 143 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 396 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 373 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 396 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 281 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 210 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 178 bp overlap
ChIP astrocyte ENCFF042YJV 249 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 289 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 335 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 99 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 355 bp overlap
ChIP brain ENCFF099ASU 309 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 280 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 123 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 197 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 217 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 244 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 249 bp overlap
ChIP chondrocyte ENCFF134ORZ 365 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 206 bp overlap
ChIP endodermal cell ENCFF471YCZ 247 bp overlap
ChIP endothelial cell ENCFF663LIE 347 bp overlap
ChIP endothelial cell ENCFF663LIE 396 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 186 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 185 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 264 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 282 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 203 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 396 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 133 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 265 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 229 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 340 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 135 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 161 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 167 bp overlap
ChIP erythroid_Don002 GSE137982.CTCF.erythroid_Don002 162 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 295 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 278 bp overlap
ChIP esophagus squamous epithelium ENCFF700BXI 316 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 211 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 282 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 223 bp overlap
ChIP fibroblast of lung ENCFF356FDN 268 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 190 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 173 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 185 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 183 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 80 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 158 bp overlap
ChIP fibroblast_LUNG ENCSR000DPM.CTCF.fibroblast_LUNG 190 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 255 bp overlap
ChIP fibroblast_LUNG ENCSR000DVA.CTCF.fibroblast_LUNG 235 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 160 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 202 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 325 bp overlap
ChIP gastrocnemius medialis ENCFF307PRR 396 bp overlap
ChIP gastrocnemius-medialis ENCSR594NSU.CTCF.gastrocnemius-medialis 215 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 329 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 396 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 185 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 252 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 322 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 396 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 173 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 272 bp overlap
ChIP heart left ventricle ENCFF244ZHV 296 bp overlap
ChIP heart right ventricle ENCFF063GTP 295 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 188 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 333 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 139 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 229 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 205 bp overlap
ChIP islet ERP004003.CTCF.islet 238 bp overlap
ChIP keratinocyte ENCFF046PBT 123 bp overlap
ChIP keratinocyte ENCFF291YDC 122 bp overlap
ChIP keratinocyte ENCFF805QIE 91 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 350 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 396 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 192 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 171 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 195 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 112 bp overlap
ChIP lymphoblast GSE155324.CTCF.lymphoblast 379 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 333 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 202 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 347 bp overlap
ChIP neural crest cell ENCFF182LWK 286 bp overlap
ChIP neural progenitor cell ENCFF420RBO 174 bp overlap
ChIP neural progenitor cell ENCFF581WPG 382 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 312 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 216 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 118 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 315 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 329 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 156 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 213 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 243 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 278 bp overlap
ChIP prostate gland ENCFF979KAF 288 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 395 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 319 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 359 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 216 bp overlap
ChIP skin ENCSR485VQV.CTCF.skin 218 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 173 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 215 bp overlap
ChIP suprapubic skin ENCFF266CTJ 272 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 269 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 188 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 197 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 318 bp overlap
CTCFL 2 datasets
ChIP FT282 GSE131931.CTCFL.FT282 317 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 206 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 245 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 222 bp overlap
DNMT3B 2 datasets
ChIP HUES-8 GSE99346.DNMT3B.HUES-8 231 bp overlap
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 232 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 65 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 263 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 162 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 305 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 83 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 317 bp overlap
ESR1 12 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 196 bp overlap
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 256 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 264 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 396 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 197 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 396 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 265 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 359 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 364 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 249 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 146 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 123 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 63 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 104 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 279 bp overlap
HOXB13 2 datasets
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 145 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 189 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 297 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 396 bp overlap
KLF14 1 dataset
ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 224 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 174 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 150 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCFF064TDQ 377 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 336 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 206 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 213 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 128 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 396 bp overlap
NFIC 3 datasets
ChIP Ishikawa ENCFF029AAD 315 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 396 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 242 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 85 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 172 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 205 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 269 bp overlap
POLR2A 7 datasets
ChIP HeLa-S3 ENCFF224LWS 197 bp overlap
ChIP HeLa-S3 ENCFF224LWS 396 bp overlap
ChIP HeLa-S3 ENCFF224LWS 263 bp overlap
ChIP K562 ENCFF215CWW 396 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 50 bp overlap
ChIP sigmoid colon ENCFF748YVT 322 bp overlap
ChIP spleen ENCFF706IUS 396 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 170 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 258 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 191 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE121355.RAD21.HCT-116 236 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 234 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 313 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 298 bp overlap
ChIP K562 ENCFF967GRF 118 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 378 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 275 bp overlap
RBPJ 2 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 323 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 332 bp overlap
RELA 2 datasets
ChIP BJAB GSE117250.RELA.BJAB 158 bp overlap
ChIP HDF_NUTLIN GSE77225.RELA.HDF_NUTLIN 116 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF861MKH 85 bp overlap
RPA2_phospho 1 dataset
ChIP HeLa GSE108172.RPA2_phospho.HeLa 396 bp overlap
SMARCA4 2 datasets
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 204 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 396 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 188 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 286 bp overlap
SRSF3 2 datasets
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 122 bp overlap
ChIP K-562 GSE120104.SRSF3.K-562 121 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 271 bp overlap
STAT3 4 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 67 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 123 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 168 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 125 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 187 bp overlap
TAF15 2 datasets
ChIP K-562 ENCSR047LSJ.TAF15.K-562 330 bp overlap
ChIP K-562 GSE120104.TAF15.K-562 214 bp overlap
TCF12 1 dataset
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 342 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 263 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 135 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 69 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 136 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 92 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 219 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 269 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 53 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 243 bp overlap
ZNF449 3 datasets
ChIP HEK293 ENCFF764ZIC 129 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 221 bp overlap
ChIP HEK293 GSE76494.ZNF449.HEK293 124 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 208 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 137 bp overlap
ZNF768 3 datasets
ChIP HEK293 ENCFF579QSI 307 bp overlap
ChIP HEK293 ENCSR070HWF.ZNF768.HEK293 209 bp overlap
ChIP HepG2 ENCFF388QCK 136 bp overlap
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