chr2 : 178,868,547 178,869,022
475 bp 124 TFs 0 linked genes
This 475 bp open chromatin element has no linked target genes and is bound by 124 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:178,863,547 – 178,874,022
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_60h DE_60h-ALX3_MA0634.2 6 bp overlap
ARGFX 1 dataset
Motif DE_60h DE_60h-ARGFX_MA1463.2 8 bp overlap
DRGX 1 dataset
Motif DE_60h DE_60h-DRGX_MA1481.2 6 bp overlap
E2F6 1 dataset
Motif DE_60h DE_60h-E2F6_MA0471.3 8 bp overlap
E2F8 1 dataset
Motif DE_60h DE_60h-E2F8_MA0865.3 9 bp overlap
EGR1 1 dataset
Motif DE_60h DE_60h-EGR1_MA0162.5 10 bp overlap
EGR3 1 dataset
Motif DE_60h DE_60h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_60h DE_60h-EGR4_MA0733.2 11 bp overlap
EMX1 1 dataset
Motif DE_60h DE_60h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_60h DE_60h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_60h DE_60h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 302 bp overlap
ESX1 1 dataset
Motif DE_60h DE_60h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_60h DE_60h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_60h DE_60h-EVX2_MA0888.2 6 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 345 bp overlap
ChIP DE DE-FOXA2-2 336 bp overlap
FOXH1 2 datasets
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap
GATA2 2 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 408 bp overlap
ChIP DE DE-GATA4-2 415 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 389 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 429 bp overlap
ChIP DE DE-GATA6-2 432 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 355 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 391 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 383 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 475 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 402 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 395 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 379 bp overlap
ChIP foregut GSE117136.GATA6.foregut 367 bp overlap
GSX1 1 dataset
Motif DE_60h DE_60h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_60h DE_60h-GSX2_MA0893.3 7 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HOXA1 1 dataset
Motif DE_60h DE_60h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_60h DE_60h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_60h DE_60h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_60h DE_60h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_60h DE_60h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_60h DE_60h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_60h DE_60h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_60h DE_60h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_60h DE_60h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_60h DE_60h-HOXB8_MA1502.2 7 bp overlap
HOXC11 1 dataset
Motif DE_60h DE_60h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap
HOXC8 1 dataset
Motif DE_60h DE_60h-HOXC8_MA1505.2 6 bp overlap
HOXD10 1 dataset
Motif DE_60h DE_60h-HOXD10_MA1506.2 10 bp overlap
HOXD11 1 dataset
Motif DE_60h DE_60h-HOXD11_MA0908.2 9 bp overlap
HOXD3 1 dataset
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
HOXD8 1 dataset
Motif DE_60h DE_60h-HOXD8_MA0910.3 7 bp overlap
Hmx1 1 dataset
Motif DE_60h DE_60h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_60h DE_60h-Hmx3_MA0898.2 9 bp overlap
ISX 1 dataset
Motif DE_60h DE_60h-ISX_MA0654.2 6 bp overlap
KLF1 1 dataset
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_60h DE_60h-KLF12_MA0742.2 9 bp overlap
KLF14 2 datasets
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap
KLF15 2 datasets
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_60h DE_60h-KLF7_MA1959.2 8 bp overlap
LHX5 1 dataset
Motif DE_60h DE_60h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_60h DE_60h-LHX6_MA0658.2 8 bp overlap
LMX1A 1 dataset
Motif DE_60h DE_60h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_60h DE_60h-LMX1B_MA0703.3 8 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
Lhx4 1 dataset
Motif DE_60h DE_60h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_60h DE_60h-Lhx8_MA0705.2 6 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 186 bp overlap
MEIS1 2 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_60h DE_60h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_60h DE_60h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_60h DE_60h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_60h DE_60h-MNX1_MA0707.3 6 bp overlap
MTF1 1 dataset
Motif DE_60h DE_60h-MTF1_MA0863.1 14 bp overlap
NKX6-1 1 dataset
Motif DE_60h DE_60h-NKX6-1_MA0674.2 7 bp overlap
NKX6-2 1 dataset
Motif DE_60h DE_60h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_60h DE_60h-NOTO_MA0710.2 7 bp overlap
NR2F1 1 dataset
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
PATZ1 1 dataset
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
Motif DE_60h DE_60h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
POU2F1 1 dataset
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
POU3F4 1 dataset
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
POU6F1 1 dataset
Motif DE_60h DE_60h-POU6F1_MA0628.2 6 bp overlap
PPARD 1 dataset
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
PRDM1 2 datasets
Motif DE_48h DE_48h-PRDM1_MA0508.4 7 bp overlap
Motif DE_60h DE_60h-PRDM1_MA0508.4 7 bp overlap
PRDM9 2 datasets
Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
PRRX1 1 dataset
Motif DE_60h DE_60h-PRRX1_MA0716.2 6 bp overlap
RAX2 1 dataset
Motif DE_60h DE_60h-RAX2_MA0717.2 6 bp overlap
RXRB 1 dataset
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
SHOX 1 dataset
Motif DE_60h DE_60h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 390 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 349 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 392 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 198 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap
SP1 1 dataset
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
SP4 3 datasets
Motif DE_48h DE_48h-SP4_MA0685.2 9 bp overlap
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SP9 2 datasets
Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap
Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap
Shox2 1 dataset
Motif DE_60h DE_60h-Shox2_MA0720.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 315 bp overlap
TEAD4 2 datasets
Motif DE_48h DE_48h-TEAD4_MA0809.3 8 bp overlap
Motif DE_60h DE_60h-TEAD4_MA0809.3 8 bp overlap
TFDP1 1 dataset
Motif DE_60h DE_60h-TFDP1_MA1122.2 8 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap
TLX2 1 dataset
Motif DE_60h DE_60h-TLX2_MA1577.2 6 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
UNCX 1 dataset
Motif DE_60h DE_60h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_60h DE_60h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_60h DE_60h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_60h DE_60h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_60h DE_60h-VSX2_MA0726.2 7 bp overlap
Wt1 1 dataset
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZFP42 1 dataset
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZNF263 2 datasets
Motif DE_48h DE_48h-ZNF263_MA0528.3 7 bp overlap
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
ZNF281 1 dataset
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF35 1 dataset
Motif DE_60h DE_60h-ZNF35_MA2333.1 7 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 1 dataset
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
ZNF524 1 dataset
Motif DE_60h DE_60h-ZNF524_MA2096.1 9 bp overlap
ZNF675 1 dataset
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
ZNF677 1 dataset
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF701 1 dataset
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
mix-a 1 dataset
Motif DE_60h DE_60h-mix-a_MA0621.2 7 bp overlap