chr2 : 77,055,059 – 77,055,213
154 bp 66 TFs 0 linked genes
This 154 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:77,050,059 – 77,060,213
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 98 bp overlap
BRD4 1 dataset
ChIP HeLa GSE51633.BRD4.HeLa 129 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 154 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 130 bp overlap
CTCF 3 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 154 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 111 bp overlap
ChIP islet ERP004003.CTCF.islet 145 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 154 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 114 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 122 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 154 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 154 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 154 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 154 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 138 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 122 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 146 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 154 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 154 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 154 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 121 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 153 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 89 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 127 bp overlap
POU5F1 1 dataset
ChIP hiPSC GSE56567.POU5F1.hiPSC 135 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 154 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 3 datasets
ChIP RH4 GSE83726.RAD21.RH4 150 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 94 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 123 bp overlap
REST 65 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 154 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 154 bp overlap
ChIP A549 ENCFF148AIS 154 bp overlap
ChIP GM12878 ENCFF235NGC 60 bp overlap
ChIP GM12878 ENCFF943QPB 116 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 154 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 154 bp overlap
ChIP GM23338 ENCFF024TCL 154 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 154 bp overlap
ChIP GP5D GSE51234.REST.GP5D 154 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 154 bp overlap
ChIP H1 ENCFF203SWY 154 bp overlap
ChIP H1 ENCFF429RUE 154 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 95 bp overlap
ChIP HEK293 ENCFF073DOT 154 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 154 bp overlap
ChIP HL-60 ENCFF589LOF 154 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 154 bp overlap
ChIP HeLa-S3 ENCFF911DTC 154 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 154 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 154 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 154 bp overlap
ChIP HepG2 ENCFF122AWR 154 bp overlap
ChIP HepG2 ENCFF800JSL 154 bp overlap
ChIP Ishikawa ENCFF456OHV 154 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 154 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 154 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 154 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 154 bp overlap
ChIP K562 ENCFF430APM 154 bp overlap
ChIP K562 ENCFF758CZL 154 bp overlap
ChIP LNCaP GSE119385.REST.LNCaP 154 bp overlap
ChIP MCF-7 ENCFF893RRD 154 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 154 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 154 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 154 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 154 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 154 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 154 bp overlap
ChIP PFSK-1 ENCFF668WMP 154 bp overlap
ChIP PFSK-1 ENCFF845VHA 154 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 154 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 154 bp overlap
ChIP Panc1 ENCFF338WSQ 154 bp overlap
ChIP Panc1 ENCFF518EEQ 154 bp overlap
ChIP Panc1 ENCFF629OJO 154 bp overlap
ChIP SK-N-SH ENCFF635KBN 118 bp overlap
ChIP SK-N-SH ENCFF861MKH 154 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 154 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 154 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 154 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 154 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 154 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 154 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 154 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 154 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 154 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 154 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 154 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 154 bp overlap
ChIP liver ENCFF240FWT 154 bp overlap
ChIP liver ENCFF577AZT 154 bp overlap
ChIP liver ENCSR867WPH.REST.liver 154 bp overlap
ChIP liver ENCSR893QWP.REST.liver 154 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 154 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP 697 GSE138031.RUNX1.697 131 bp overlap
SIN3A 7 datasets
ChIP H1 ENCFF042ZSL 154 bp overlap
ChIP H1 ENCFF896IJG 154 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 154 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 116 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 154 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 154 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 154 bp overlap
SMAD4 1 dataset
ChIP WTC11 ENCFF195KVB 154 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 154 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 154 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 154 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 154 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 154 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 154 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 154 bp overlap
ChIP A549 ENCFF243FTL 154 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
ChIP K-562 ENCSR000BNN.THAP1.K-562 97 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 154 bp overlap
TRIM28 3 datasets
ChIP WA01 GSE78099.TRIM28.WA01 154 bp overlap
ChIP WIBR3 GSE84382.TRIM28.WIBR3 148 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 154 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 120 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 154 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 129 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 154 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 154 bp overlap
ZBTB33 1 dataset
ChIP WTC11 ENCFF048CFR 154 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 154 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 154 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ChIP WTC11 ENCFF352POG 154 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 154 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 154 bp overlap
ZNF343 1 dataset
Motif ES_0h ES_0h-ZNF343_MA1711.2 16 bp overlap
ZNF354C 1 dataset
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 154 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF8 1 dataset
ChIP SK-N-SH ENCFF131SMT 154 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 154 bp overlap
ZSCAN4 1 dataset
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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