chr2 : 66,437,807 66,438,021
214 bp 66 TFs 2 linked genes
This 214 bp open chromatin element is linked to MEIS1-AS3 and MEIS1 and is bound by 66 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MEIS1-AS3 4.3 kb Proximal Proximity
MEIS1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:66,432,807 – 66,443,021
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 2 datasets
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 99 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 93 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 90 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 214 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 159 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 141 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 211 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 150 bp overlap
BRD3 3 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 144 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 214 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 156 bp overlap
BRD4 10 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 188 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 214 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 143 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 214 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 214 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 127 bp overlap
ChIP SEM GSE83671.BRD4.SEM 103 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 103 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 180 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 214 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 214 bp overlap
ChIP hESC GSE133412.CBX7.hESC 214 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 214 bp overlap
CDK8 2 datasets
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 214 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 103 bp overlap
CHD1 2 datasets
ChIP IMR-90 ENCFF921SVK 214 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 208 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 214 bp overlap
CTCF 5 datasets
ChIP esophagus squamous epithelium ENCFF037IYT 156 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 116 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 122 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 145 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 76 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 196 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHRB GSE40343.E2F7.IMR-90_SENES_SHRB 145 bp overlap
ESR1 1 dataset
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 214 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 199 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 214 bp overlap
EZH2 14 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 214 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 214 bp overlap
ChIP GM23338 ENCFF613YON 214 bp overlap
ChIP GM23338 ENCFF886DXX 214 bp overlap
ChIP H1 ENCFF232NZA 214 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 169 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 214 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 214 bp overlap
ChIP neural progenitor cell ENCFF018MKA 214 bp overlap
ChIP neural progenitor cell ENCFF018MKA 180 bp overlap
ChIP neural progenitor cell ENCFF472NFV 214 bp overlap
ChIP neural progenitor cell ENCFF472NFV 214 bp overlap
ChIP neural progenitor cell ENCFF472NFV 214 bp overlap
ChIP neural progenitor cell ENCFF472NFV 68 bp overlap
FOXA1 1 dataset
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 214 bp overlap
GABPA 1 dataset
ChIP MCF-7 GSE72082.GABPA.MCF-7 56 bp overlap
GATA4 2 datasets
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 214 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 138 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 149 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 214 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 214 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 214 bp overlap
JARID2 6 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 80 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 214 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 214 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 214 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 214 bp overlap
ChIP hESC GSE133412.JARID2.hESC 214 bp overlap
KAT7 1 dataset
ChIP MOLM-13 GSE133516.KAT7.MOLM-13 214 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 144 bp overlap
KMT2A 3 datasets
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 103 bp overlap
ChIP MOLM-13_VTP-d3-180110 GSE127507.KMT2A.MOLM-13_VTP-d3-180110 214 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 214 bp overlap
MAX 2 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 179 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 99 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 130 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 214 bp overlap
MED1 4 datasets
ChIP G296S GSE85628.MED1.G296S 134 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 134 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 214 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 82 bp overlap
MEN1 2 datasets
ChIP IMS-M2_DMSO GSE129636.MEN1.IMS-M2_DMSO 187 bp overlap
ChIP MOLM-13_DMSO-D4-18091 GSE127507.MEN1.MOLM-13_DMSO-D4-18091 214 bp overlap
MXI1 4 datasets
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 145 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 170 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 127 bp overlap
ChIP neural cell ENCFF623HQN 214 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 214 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 214 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 123 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 214 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Bethyl275_G GSE118494.NCAPH2.IMR-90_Bethyl275_G 111 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 214 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 56 bp overlap
NR4A1 1 dataset
ChIP MOLM-14_DHE GSE124963.NR4A1.MOLM-14_DHE 104 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 214 bp overlap
PCGF2 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 214 bp overlap
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 50 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 214 bp overlap
POLR2A 25 datasets
ChIP SK-N-MC ENCFF088IVG 214 bp overlap
ChIP SK-N-MC ENCFF088IVG 167 bp overlap
ChIP adrenal gland ENCFF843OBJ 214 bp overlap
ChIP body of pancreas ENCFF501FEC 214 bp overlap
ChIP body of pancreas ENCFF675RCN 214 bp overlap
ChIP body of pancreas ENCFF727UBE 214 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 214 bp overlap
ChIP gastroesophageal sphincter ENCFF043KAM 208 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 203 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 214 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 208 bp overlap
ChIP gastroesophageal sphincter ENCFF461UHJ 118 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 214 bp overlap
ChIP sigmoid colon ENCFF101ILL 171 bp overlap
ChIP sigmoid colon ENCFF653CQA 214 bp overlap
ChIP sigmoid colon ENCFF661AMI 214 bp overlap
ChIP sigmoid colon ENCFF725QFT 162 bp overlap
ChIP sigmoid colon ENCFF748YVT 141 bp overlap
ChIP sigmoid colon ENCFF754JQR 214 bp overlap
ChIP spleen ENCFF706IUS 214 bp overlap
ChIP transverse colon ENCFF098HBD 214 bp overlap
ChIP transverse colon ENCFF840PXT 147 bp overlap
ChIP transverse colon ENCFF840PXT 185 bp overlap
ChIP vagina ENCFF384GAB 172 bp overlap
ChIP vagina ENCFF384GAB 214 bp overlap
RAD21 3 datasets
ChIP RH4 GSE83726.RAD21.RH4 140 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 214 bp overlap
ChIP neural cell ENCFF564MOT 214 bp overlap
REST 2 datasets
ChIP neural cell ENCFF882LXX 214 bp overlap
ChIP neural cell ENCFF882LXX 59 bp overlap
RNF2 7 datasets
ChIP H1 ENCFF239FFS 214 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.RNF2.HEK293T_PCGF1356fl 193 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.RNF2.HEK293T_PCGF1356fl_OHT 214 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 169 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.RNF2.HEK293T_PCGF135fl_OHT 214 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 214 bp overlap
ChIP HEK293T_RING1Bfl GSE119618.RNF2.HEK293T_RING1Bfl 214 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa GSE108172.RPA2_phospho.HeLa 168 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 214 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 214 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 145 bp overlap
SMARCA4 6 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 74 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 214 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 214 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 159 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 214 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 214 bp overlap
SMARCC1 2 datasets
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 214 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 214 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 214 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 81 bp overlap
SRF 1 dataset
ChIP Ishikawa ENCSR000BTD.SRF.Ishikawa 120 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 94 bp overlap
SUZ12 14 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 214 bp overlap
ChIP H1 ENCFF507HGF 181 bp overlap
ChIP H1 ENCFF881NFR 214 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 214 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 214 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 214 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 214 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 214 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 214 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 214 bp overlap
ChIP NT2/D1 ENCFF574SXS 133 bp overlap
ChIP NT2/D1 ENCFF574SXS 214 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 194 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 214 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 107 bp overlap
TBX5 3 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 80 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 80 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 186 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 152 bp overlap
TP53 2 datasets
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 94 bp overlap
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 77 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 139 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 145 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 204 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 133 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 103 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 127 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 130 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 214 bp overlap