chrX : 101,624,116 – 101,624,273
157 bp 60 TFs 4 linked genes
This 157 bp open chromatin element is linked to 4 target genes and is bound by 60 transcription factors.
Linked Genes
4 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ARMCX3-AS1 at TSS At TSS Proximity
ARMCX3 990 bp At TSS Proximity
ENSG00000261101 3.6 kb Proximal Proximity
ARMCX6 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:101,619,116 – 101,629,273
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 73 bp overlap
ARID4A 1 dataset
ChIP Hep-G2 ENCSR386UBO.ARID4A.Hep-G2 157 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 119 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 157 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 157 bp overlap
BRD4 7 datasets
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 157 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 157 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 113 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 120 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 53 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 148 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 105 bp overlap
CTCF 16 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 134 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 142 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 127 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 112 bp overlap
ChIP MCF-7 ENCFF424NQR 157 bp overlap
ChIP MCF-7 ENCFF844STM 157 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 157 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 115 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 109 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 133 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 121 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 151 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 157 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 157 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 157 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 144 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 127 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 106 bp overlap
ChIP K562 ENCFF136LTS 157 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 109 bp overlap
EGR1 5 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 157 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 157 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 157 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 138 bp overlap
ChIP K562 ENCFF006PJY 157 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 157 bp overlap
EP300 1 dataset
ChIP Kasumi-1 GSE115115.EP300.Kasumi-1 69 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 157 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 157 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 111 bp overlap
HDAC1 4 datasets
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_4-OHT_clone14 155 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 69 bp overlap
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 157 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 157 bp overlap
HMGXB4 1 dataset
ChIP Hep-G2 ENCSR599XKG.HMGXB4.Hep-G2 149 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 143 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 116 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 118 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 114 bp overlap
ChIP MCF-7 ENCFF618FCM 157 bp overlap
ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 157 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 144 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 157 bp overlap
MAX 4 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 157 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 136 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 106 bp overlap
ChIP K562 ENCFF524IJO 157 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 157 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 115 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR390VGH.MNT.K-562 157 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 155 bp overlap
MXI1 3 datasets
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 81 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 157 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 157 bp overlap
MYOD1 3 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 136 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 110 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 118 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 113 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 157 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 146 bp overlap
ChIP HepG2 ENCFF723PFC 157 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 76 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 99 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF675RCN 157 bp overlap
ChIP thyroid gland ENCFF979LRR 157 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 157 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 157 bp overlap
RAD21 4 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 157 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 85 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 141 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 91 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 157 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 157 bp overlap
RUNX1 1 dataset
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 98 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 157 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 117 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 157 bp overlap
SIN3A 7 datasets
ChIP H1 ENCFF042ZSL 157 bp overlap
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 157 bp overlap
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 125 bp overlap
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 129 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 129 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 149 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 151 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 93 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 80 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 157 bp overlap
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 51 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 157 bp overlap
ChIP keratinocyte_SNAI2 GSE55421.SNAI2.keratinocyte_SNAI2 157 bp overlap
SPI1 12 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 153 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 133 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 133 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 118 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 76 bp overlap
ChIP GM12891 ENCFF563IUT 84 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 102 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 157 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 157 bp overlap
ChIP K562 ENCFF410ORC 151 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 155 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 94 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 114 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE43834.TCF12.Kasumi-1 90 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 97 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 157 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 157 bp overlap
YY1 1 dataset
ChIP GM12892 ENCSR000BLT.YY1.GM12892 124 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 128 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 156 bp overlap
ZNF148 1 dataset
ChIP K-562 ENCSR018MSO.ZNF148.K-562 157 bp overlap
ZNF281 2 datasets
ChIP K-562 GSE121133.ZNF281.K-562 157 bp overlap
ChIP K562 ENCFF594VNM 157 bp overlap
ZNF341 4 datasets
ChIP HEK293 ENCFF944VMC 65 bp overlap
ChIP HEK293 ENCFF944VMC 54 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 157 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 96 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 127 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 157 bp overlap
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