chrX : 85,002,863 – 85,003,519
656 bp 77 TFs 1 linked gene
This 656 bp open chromatin element is linked to APOOL and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
APOOL 356 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:84,997,863 – 85,008,519
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 109 bp overlap
ARID4A 1 dataset
ChIP HepG2 ENCFF142DIE 98 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 94 bp overlap
Ahr::Arnt 4 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_24h DE_24h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 85 bp overlap
BRD4 5 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 191 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 152 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 152 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 88 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 57 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 163 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 74 bp overlap
E2F2 3 datasets
Motif DE_12h DE_12h-E2F2_MA0864.3 13 bp overlap
Motif DE_24h DE_24h-E2F2_MA0864.3 13 bp overlap
Motif DE_60h DE_60h-E2F2_MA0864.3 13 bp overlap
ETV5::HOXA2 1 dataset
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
FEZF2 3 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 110 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 197 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 140 bp overlap
GATA1 2 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 150 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 189 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 437 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 120 bp overlap
GATA4 2 datasets
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 85 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 159 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 64 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 99 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 65 bp overlap
GTF3C2 1 dataset
ChIP HeLa-S3 ENCFF144RTV 141 bp overlap
HDAC1 1 dataset
ChIP HepG2 ENCFF750ZWM 145 bp overlap
HOXB13 2 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 60 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 72 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 75 bp overlap
ChIP GM12878 ENCFF824TGK 113 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 71 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
ChIP GM12878 ENCFF918AID 75 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 189 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 83 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 155 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 148 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 53 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 75 bp overlap
KMT2A 3 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 55 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 357 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 75 bp overlap
KMT2B 1 dataset
ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 140 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 445 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 199 bp overlap
MAFK 3 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MED26 3 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 280 bp overlap
ChIP HCT-116 GSE121355.MED26.HCT-116 79 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 204 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 84 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 121 bp overlap
NKX2-4 1 dataset
Motif DE_24h DE_24h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_24h DE_24h-NKX2-8_MA0673.2 8 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 58 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 161 bp overlap
NR2F2 1 dataset
ChIP liver ENCFF565JGD 50 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 107 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 59 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 293 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 184 bp overlap
PHF8 1 dataset
ChIP A-549 ENCSR541AOQ.PHF8.A-549 141 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 193 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 191 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 131 bp overlap
POLR3A 1 dataset
ChIP HeLa-S3 ENCFF777TAS 346 bp overlap
RAD21 1 dataset
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 160 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 64 bp overlap
RUNX1 3 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 133 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 92 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 87 bp overlap
RUNX1-RUNX1T1 1 dataset
ChIP AML GSE131939.RUNX1-RUNX1T1.AML 104 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 61 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 61 bp overlap
SIN3A 3 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 76 bp overlap
ChIP MCF-7 ENCFF521RDC 57 bp overlap
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 138 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 50 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 152 bp overlap
ChIP HGrC1_C134W-TGF_SMAD4-KO GSE138496.SMAD2-3.HGrC1_C134W-TGF_SMAD4-KO 165 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 161 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 160 bp overlap
ChIP K562 ENCFF506JCB 84 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 152 bp overlap
SP5 6 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
SREBP2 4 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 312 bp overlap
ChIP monocyte GSE129202.SREBP2.monocyte 204 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 325 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 245 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 94 bp overlap
TBP 2 datasets
ChIP Hep-G2 ENCSR000EEL.TBP.Hep-G2 120 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 168 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 163 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
YEATS4 1 dataset
ChIP HepG2 ENCFF340OIC 87 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 193 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 187 bp overlap
ZBED2 1 dataset
ChIP SUIT-2 GSE141606.ZBED2.SUIT-2 134 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 85 bp overlap
ZNF135 6 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 157 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 137 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 127 bp overlap
ZNF407 1 dataset
ChIP K-562 ENCSR011NOZ.ZNF407.K-562 82 bp overlap
ZNF441 2 datasets
ChIP HEK293T GSE78099.ZNF441.HEK293T 293 bp overlap
ChIP HepG2 ENCFF738UDK 132 bp overlap
ZNF460 7 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
ChIP HepG2 ENCFF007NNM 386 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 80 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 150 bp overlap
ZNF770 3 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
Motif DE_60h DE_60h-ZNF770_MA2099.1 8 bp overlap
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