chr2 : 23,944,622 23,944,918
296 bp 69 TFs 1 linked gene
This 296 bp open chromatin element is linked to UBXN2A and is bound by 69 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
UBXN2A 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:23,939,622 – 23,949,918
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
ARID4B 2 datasets
ChIP HepG2 ENCFF519OXJ 296 bp overlap
ChIP HepG2 ENCFF519OXJ 287 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 284 bp overlap
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 68 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 133 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 69 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 223 bp overlap
EGR1 5 datasets
ChIP HepG2 ENCFF674RQO 296 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 174 bp overlap
ChIP K562 ENCFF006PJY 98 bp overlap
ChIP K562 ENCFF113OPQ 296 bp overlap
ChIP K562 ENCFF895KGN 285 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 110 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 248 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF894AYY 282 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 113 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 294 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 161 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 163 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 282 bp overlap
GFI1 1 dataset
ChIP HepG2 ENCFF472INF 212 bp overlap
HDAC2 3 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 173 bp overlap
ChIP HepG2 ENCFF087XCR 202 bp overlap
ChIP HepG2 ENCFF990GUQ 296 bp overlap
HEXIM1 1 dataset
ChIP A-375_DMSO GSE68052.HEXIM1.A-375_DMSO 133 bp overlap
HIC2 1 dataset
ChIP HepG2 ENCFF927POV 296 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 296 bp overlap
ChIP K562 ENCFF055GAZ 296 bp overlap
ChIP K562 ENCFF317JJX 296 bp overlap
HMG20B 1 dataset
ChIP HepG2 ENCFF756WYV 51 bp overlap
HNF4A 7 datasets
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 91 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 89 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 118 bp overlap
ChIP HepG2 ENCFF146SSF 227 bp overlap
ChIP liver ENCFF354NRH 152 bp overlap
ChIP liver ENCFF449HPV 211 bp overlap
ChIP liver ERP002306.HNF4A.liver 154 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF323ATZ 139 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 132 bp overlap
ChIP HepG2 ENCFF374TCI 296 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 296 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 263 bp overlap
MED1 1 dataset
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 189 bp overlap
NR5A1 1 dataset
ChIP HepG2 ENCFF970YZO 234 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 284 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 256 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 296 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 171 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 296 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 296 bp overlap
PPARG 3 datasets
ChIP HepG2 ENCFF329FBJ 197 bp overlap
ChIP HepG2 ENCFF329FBJ 296 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 54 bp overlap
PROX1 3 datasets
ChIP HepG2 ENCFF016ZJS 272 bp overlap
ChIP HepG2 ENCFF016ZJS 296 bp overlap
ChIP SW480 GSE60390.PROX1.SW480 93 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 295 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 258 bp overlap
RCOR2 2 datasets
ChIP HepG2 ENCFF310RFX 242 bp overlap
ChIP HepG2 ENCFF310RFX 260 bp overlap
RELA 1 dataset
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 172 bp overlap
RXRA 3 datasets
ChIP liver ENCFF077DAP 281 bp overlap
ChIP liver ENCFF807CIA 244 bp overlap
ChIP liver ENCFF807CIA 296 bp overlap
RXRB 2 datasets
ChIP HepG2 ENCFF539ZAY 296 bp overlap
ChIP HepG2 ENCFF539ZAY 181 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 296 bp overlap
SMAD3 2 datasets
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 126 bp overlap
ChIP HepG2 ENCFF309PKF 296 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 245 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 175 bp overlap
ChIP liver ENCFF769YSM 213 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP5 2 datasets
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF931FHV 136 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SRF 1 dataset
ChIP HepG2 ENCFF625QHW 86 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 296 bp overlap
TBX3 1 dataset
ChIP HepG2 ENCFF178RIL 296 bp overlap
U2AF1L5,U2AF1 1 dataset
ChIP HepG2 ENCFF758IXU 79 bp overlap
XRCC5 1 dataset
ChIP HepG2 ENCFF680LVJ 296 bp overlap
YY1 3 datasets
ChIP liver ENCFF400MBC 94 bp overlap
ChIP liver ENCFF515BWJ 296 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 160 bp overlap
ZBED4 1 dataset
ChIP HepG2 ENCFF157CDZ 270 bp overlap
ZBTB7B 2 datasets
ChIP HepG2 ENCFF763OCV 296 bp overlap
ChIP HepG2 ENCFF763OCV 218 bp overlap
ZFHX3 1 dataset
ChIP HepG2 ENCFF082SJV 296 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 296 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 235 bp overlap