chrX : 75,746,978 75,747,493
515 bp 80 TFs 1 linked gene
This 515 bp open chromatin element is linked to TTC3P1 and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TTC3P1 67 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:75,741,978 – 75,752,493
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 337 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 131 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 221 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 133 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 97 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 50 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 132 bp overlap
BRD4 4 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 50 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP T-cell_iBET-BD1 GSE138084.BRD4.T-cell_iBET-BD1 183 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 221 bp overlap
CREB1 14 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 168 bp overlap
ChIP A-549 ENCSR000BRC.CREB1.A-549 203 bp overlap
ChIP GM12878 ENCFF870CVH 351 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 133 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 209 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP Hep-G2 ENCSR000BVL.CREB1.Hep-G2 244 bp overlap
ChIP HepG2 ENCFF245CBB 160 bp overlap
ChIP LNCaP GSE63034.CREB1.LNCaP 216 bp overlap
ChIP LNCaP-abl GSE63034.CREB1.LNCaP-abl 179 bp overlap
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 300 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 328 bp overlap
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 248 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 136 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 385 bp overlap
CREM 3 datasets
ChIP GM12878 ENCSR839XZU.CREM.GM12878 145 bp overlap
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 177 bp overlap
ChIP K-562 ENCSR077DKV.CREM.K-562 105 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 218 bp overlap
DPF2 1 dataset
ChIP BIN-67 GSE117734.DPF2.BIN-67 193 bp overlap
E2F1 2 datasets
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 326 bp overlap
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 283 bp overlap
E2F6 3 datasets
ChIP A-549 ENCSR000BTC.E2F6.A-549 123 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 91 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 142 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 215 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 112 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 206 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 134 bp overlap
ERG 4 datasets
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 273 bp overlap
ChIP SEM GSE117864.ERG.SEM 298 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 84 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 280 bp overlap
ESR1 2 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 112 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 226 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 210 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 250 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 255 bp overlap
ETV1 4 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 248 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 113 bp overlap
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 77 bp overlap
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 86 bp overlap
ETV4 1 dataset
ChIP Hep-G2 ENCSR714YZG.ETV4.Hep-G2 171 bp overlap
FOXA1 4 datasets
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 222 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 84 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 155 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 133 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 355 bp overlap
GABPA 11 datasets
ChIP Hep-G2 ENCSR000BJK.GABPA.Hep-G2 123 bp overlap
ChIP Hep-G2 ENCSR269TNX.GABPA.Hep-G2 184 bp overlap
ChIP Hep-G2 GSE72082.GABPA.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF180FFY 201 bp overlap
ChIP HepG2 ENCFF180FFY 451 bp overlap
ChIP HepG2 ENCFF467OEO 301 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 213 bp overlap
ChIP SK-N-SH ENCFF755TJJ 401 bp overlap
ChIP SK-N-SH ENCSR000BTG.GABPA.SK-N-SH 146 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 195 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 353 bp overlap
GABPB1 1 dataset
ChIP HepG2 ENCFF315AWN 293 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 237 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 168 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 195 bp overlap
ChIP HepG2 ENCFF355PIC 505 bp overlap
ChIP HepG2 ENCFF952XAB 505 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 194 bp overlap
KDM4A 3 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 75 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 258 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 269 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 114 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 303 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 316 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 298 bp overlap
ChIP HepG2 ENCFF507HCX 496 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCFF682IKN 345 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 145 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 515 bp overlap
MYC 1 dataset
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 94 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 186 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 353 bp overlap
NELFE 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 152 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 245 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 56 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 86 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 241 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 158 bp overlap
PHF8 2 datasets
ChIP H1 ENCFF427UFV 277 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 98 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF446ZGT 88 bp overlap
ChIP spleen ENCFF446ZGT 195 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 375 bp overlap
RELA 1 dataset
ChIP CD4_Th1_BAY GSE62482.RELA.CD4_Th1_BAY 116 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 407 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 370 bp overlap
RUNX1 5 datasets
ChIP AML GSE111821.RUNX1.AML 211 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 293 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 210 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 293 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 311 bp overlap
RUNX1T1 6 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 87 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 329 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 252 bp overlap
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 201 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 288 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 323 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 129 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 223 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 143 bp overlap
SMAD3 4 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 90 bp overlap
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 90 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 171 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 135 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 139 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 183 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 231 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 349 bp overlap
SMARCC1 4 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 281 bp overlap
ChIP MCF-7 GSE124225.SMARCC1.MCF-7 368 bp overlap
ChIP MCF-7_KO GSE124225.SMARCC1.MCF-7_KO 192 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 384 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 318 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 171 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 98 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 336 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 217 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 288 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 115 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 133 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 293 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 396 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 337 bp overlap
YY1 4 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 88 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 78 bp overlap
ChIP liver ENCFF400MBC 164 bp overlap
ChIP liver ENCFF515BWJ 139 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 338 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCFF262GZJ 210 bp overlap
ZBTB26 2 datasets
ChIP HEK293 ENCFF752POA 297 bp overlap
ChIP HEK293 ENCFF752TCU 253 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 63 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 77 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 199 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 364 bp overlap
ChIP HepG2 ENCFF331VPZ 310 bp overlap