chr21 : 31,160,609 31,161,015
406 bp 65 TFs 0 linked genes
This 406 bp open chromatin element has no linked target genes and is bound by 65 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:31,155,609 – 31,166,015
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 406 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 135 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 252 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 349 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 314 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD2.K-562_iBET-BD2-IFNG 202 bp overlap
BRD4 5 datasets
ChIP BE2C GSE80151.BRD4.BE2C 406 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 215 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 206 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 406 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 290 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCFF669KMB 324 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 74 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 163 bp overlap
CTCF 5 datasets
ChIP dorsolateral prefrontal cortex ENCFF245PVD 99 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 313 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 160 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 233 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 216 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 222 bp overlap
ESR1 2 datasets
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 229 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 231 bp overlap
EZH2 1 dataset
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 211 bp overlap
GATA2 3 datasets
ChIP SH-SY5Y ENCFF485YIB 303 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 240 bp overlap
ChIP SK-N-SH ENCFF764OZD 219 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 140 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 210 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 275 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 72 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 303 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 224 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 309 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 406 bp overlap
MYC 1 dataset
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 160 bp overlap
MYCN 4 datasets
ChIP BE2C GSE80151.MYCN.BE2C 293 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 257 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 348 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 293 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYB 1 dataset
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 223 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 110 bp overlap
OLIG2 3 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 391 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 240 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 208 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 2 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 254 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 191 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 251 bp overlap
POLR2A 1 dataset
ChIP uterus ENCFF566ZPY 190 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 277 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 406 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 210 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 144 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 112 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 261 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 333 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 325 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 119 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 377 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 145 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 56 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 289 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 321 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 240 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 151 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 286 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 187 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 406 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0828.3 10 bp overlap
STAT3 2 datasets
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 313 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 201 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 406 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 217 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
USF1 2 datasets
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 191 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 160 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 167 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 167 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF410 1 dataset
ChIP K-562 GSE97661.ZNF410.K-562 102 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap