chr18 : 62,328,019 62,328,280
261 bp 86 TFs 1 linked gene
This 261 bp open chromatin element is linked to TNFRSF11A and is bound by 86 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TNFRSF11A 2.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:62,323,019 – 62,333,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ASCL1 2 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 173 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 151 bp overlap
Atoh1 2 datasets
Motif DE_36h DE_36h-Atoh1_MA1467.3 7 bp overlap
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 209 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 203 bp overlap
CDX2 1 dataset
ChIP LS180_125 GSE31939.CDX2.LS180_125 156 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 178 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 172 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 261 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 195 bp overlap
EZH2 4 datasets
ChIP SF8628 GSE94834.EZH2.SF8628 261 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 261 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 261 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 160 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 237 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 261 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 157 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 249 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 261 bp overlap
GATA2 2 datasets
ChIP endothelial cell of umbilical vein ENCFF148NLK 261 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 224 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 261 bp overlap
ChIP DE DE-GATA4-2 261 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 261 bp overlap
ChIP foregut GSE117136.GATA4.foregut 261 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 261 bp overlap
GATA5 3 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 22 datasets
ChIP AGS GSE51705.GATA6.AGS 248 bp overlap
ChIP DE DE-GATA6-1 261 bp overlap
ChIP DE DE-GATA6-2 261 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 261 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 261 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 261 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 261 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 261 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 261 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 181 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 178 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 261 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 182 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 261 bp overlap
ChIP foregut GSE117136.GATA6.foregut 261 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 261 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 261 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 261 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 261 bp overlap
Gata3 3 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 2 datasets
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HOXB4 1 dataset
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif DE_60h DE_60h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 230 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 147 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 144 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 234 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 230 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 247 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 246 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 261 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 261 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 227 bp overlap
MYCN 2 datasets
ChIP NGP GSE80151.MYCN.NGP 182 bp overlap
ChIP NGP GSE80151.MYCN.NGP 185 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 91 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NEUROD1 2 datasets
Motif DE_36h DE_36h-NEUROD1_MA1109.2 8 bp overlap
Motif DE_60h DE_60h-NEUROD1_MA1109.2 8 bp overlap
NEUROG2 2 datasets
Motif DE_36h DE_36h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_60h DE_60h-NEUROG2_MA1642.2 7 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 96 bp overlap
Neurod2 2 datasets
Motif DE_36h DE_36h-Neurod2_MA0668.3 8 bp overlap
Motif DE_60h DE_60h-Neurod2_MA0668.3 8 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 261 bp overlap
POLR2A 3 datasets
ChIP Peyer's patch ENCFF767HVN 259 bp overlap
ChIP transverse colon ENCFF610RWV 242 bp overlap
ChIP transverse colon ENCFF840PXT 242 bp overlap
POU1F1 1 dataset
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
POU2F2 1 dataset
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU6F1 1 dataset
Motif DE_60h DE_60h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_60h DE_60h-POU6F2_MA0793.2 9 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 220 bp overlap
RBPJ 3 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 261 bp overlap
RELA 2 datasets
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 221 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 197 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 89 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 193 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 261 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 261 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 188 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 261 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 261 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 261 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 125 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 261 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 161 bp overlap
SND1 2 datasets
ChIP NHEK GSE29498.SND1.NHEK 149 bp overlap
ChIP NHEK GSE29498.SND1.NHEK 72 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 221 bp overlap
SPIC 1 dataset
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 261 bp overlap
TAL1 1 dataset
ChIP ProEs GSE59087.TAL1.ProEs 143 bp overlap
TRPS1 3 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TWIST1 2 datasets
Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap
Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap
Tbx6 1 dataset
Motif DE_60h DE_60h-Tbx6_MA1567.3 9 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 251 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 223 bp overlap
ZBTB10 2 datasets
ChIP HEK293 ENCFF679BCK 252 bp overlap
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 226 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 256 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 259 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 154 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 182 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 197 bp overlap
ZNF24 3 datasets
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 168 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 167 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 166 bp overlap
ZNF263 4 datasets
ChIP HEK293 ENCFF336CWQ 261 bp overlap
ChIP HEK293T GSE78099.ZNF263.HEK293T 181 bp overlap
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 181 bp overlap
ChIP HepG2 ENCFF626SSV 231 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 146 bp overlap
ZNF320 1 dataset
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 157 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 132 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 161 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 261 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 237 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 261 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 196 bp overlap
ZNF677 1 dataset
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF701 3 datasets
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF75A 2 datasets
Motif DE_36h DE_36h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZSCAN16 2 datasets
Motif DE_36h DE_36h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 261 bp overlap