chr18 : 55,892,882 55,893,421
539 bp 95 TFs 0 linked genes
This 539 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:55,887,882 – 55,898,421
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP K562 ENCFF604FPV 505 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF674KTF 384 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BRD2 7 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 65 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 120 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 99 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 99 bp overlap
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 154 bp overlap
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 85 bp overlap
ChIP NCI-H23 GSE113714.BRD2.NCI-H23 73 bp overlap
BRD4 2 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 55 bp overlap
ChIP K562 ENCFF092PWQ 154 bp overlap
BRD9 1 dataset
ChIP K562 ENCFF480JXZ 451 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 451 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 255 bp overlap
DUXA 1 dataset
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
EGR1 2 datasets
ChIP K562 ENCFF113OPQ 444 bp overlap
ChIP K562 ENCFF895KGN 385 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF454SBL 412 bp overlap
EP400 2 datasets
ChIP K562 ENCFF850OZQ 449 bp overlap
ChIP K562 ENCFF850OZQ 195 bp overlap
FOXA1 2 datasets
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 65 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
ChIP K562 ENCFF781VSC 312 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 2 datasets
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXK2 4 datasets
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
ChIP K562 ENCFF245WKP 200 bp overlap
ChIP K562 ENCFF245WKP 417 bp overlap
ChIP K562 ENCFF851PFH 206 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
ChIP WTC11 ENCFF338WGC 465 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GABPB1 2 datasets
ChIP K562 ENCFF015GDS 536 bp overlap
ChIP K562 ENCFF015GDS 334 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF485ALN 417 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF928TKZ 426 bp overlap
IKZF1 3 datasets
ChIP K562 ENCFF348IBL 360 bp overlap
ChIP K562 ENCFF771OHZ 261 bp overlap
ChIP K562 ENCFF771OHZ 249 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
L3MBTL2 2 datasets
ChIP K562 ENCFF320EQC 534 bp overlap
ChIP K562 ENCFF320EQC 334 bp overlap
MGA 2 datasets
ChIP K562 ENCFF140CEX 539 bp overlap
ChIP K562 ENCFF140CEX 349 bp overlap
MNT 2 datasets
ChIP K562 ENCFF450LDL 530 bp overlap
ChIP K562 ENCFF820IGH 495 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF866HRM 412 bp overlap
NFRKB 3 datasets
ChIP K562 ENCFF057YFW 488 bp overlap
ChIP K562 ENCFF057YFW 488 bp overlap
ChIP K562 ENCFF221WAF 411 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NONO 1 dataset
ChIP K562 ENCFF268WFF 317 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 411 bp overlap
NR2F1 2 datasets
ChIP K562 ENCFF221HJH 139 bp overlap
ChIP K562 ENCFF221HJH 243 bp overlap
NRF1 2 datasets
ChIP K562 ENCFF689EWI 441 bp overlap
ChIP K562 ENCFF791UHF 451 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PHF8 1 dataset
ChIP K562 ENCFF217UCA 486 bp overlap
POLR2A 4 datasets
ChIP K562 ENCFF215CWW 538 bp overlap
ChIP K562 ENCFF262YXJ 130 bp overlap
ChIP K562 ENCFF836GHX 396 bp overlap
ChIP K562 ENCFF836GHX 391 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 468 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 353 bp overlap
RB1 1 dataset
ChIP K562 ENCFF627ZBG 323 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 111 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 111 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 523 bp overlap
SMAD4 2 datasets
ChIP K562 ENCFF628RBP 483 bp overlap
ChIP K562 ENCFF628RBP 389 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SOX6 1 dataset
ChIP K562 ENCFF059YCJ 409 bp overlap
SUPT5H 2 datasets
ChIP K562 ENCFF902PAW 303 bp overlap
ChIP K562 ENCFF902PAW 375 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 75 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 331 bp overlap
TAF9B 2 datasets
ChIP K562 ENCFF121ZIF 144 bp overlap
ChIP K562 ENCFF121ZIF 398 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 515 bp overlap
TRIM24 1 dataset
ChIP K562 ENCFF616RIL 451 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 7 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 172 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 168 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 86 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 65 bp overlap
ChIP K-562 ENCSR000EWF.YY1.K-562 64 bp overlap
ChIP K562 ENCFF199FNC 196 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 81 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 160 bp overlap
ChIP K562 ENCFF352SDL 206 bp overlap
ChIP K562 ENCFF352SDL 508 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF281 2 datasets
ChIP K562 ENCFF594VNM 408 bp overlap
ChIP K562 ENCFF594VNM 539 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF267NLX 438 bp overlap
ZSCAN29 2 datasets
ChIP K562 ENCFF797SOU 376 bp overlap
ChIP K562 ENCFF842XOY 365 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap