chr18 : 6,633,456 6,633,739
283 bp 105 TFs 0 linked genes
This 283 bp open chromatin element has no linked target genes and is bound by 105 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:6,628,456 – 6,638,739
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_20 GSE104399.AR.breast_tumor_Male_20 188 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 239 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 159 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 157 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 270 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 98 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 283 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 224 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 219 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 80 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ERF 1 dataset
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ETS1 3 datasets
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ChIP GM23338 ENCFF701IZH 283 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 191 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 283 bp overlap
EZH2 1 dataset
ChIP THP-1 GSE135024.EZH2.THP-1 212 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 7 datasets
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
ChIP LNCaP-C4-2B GSE40050.FOXA1.LNCaP-C4-2B 247 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 255 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 225 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 186 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 245 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 113 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 283 bp overlap
ChIP DE DE-FOXA2-2 283 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 283 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 283 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 283 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 191 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 283 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 2 datasets
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GCM1 1 dataset
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 155 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 140 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 233 bp overlap
MTF1 1 dataset
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 283 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 279 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 283 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 218 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 242 bp overlap
ChIP hESC GSE20650.NANOG.hESC 205 bp overlap
ChIP hESC GSE18292.NANOG.hESC 142 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 119 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF199JUI 283 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 141 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 5 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 283 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 131 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 283 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 234 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
REL 1 dataset
Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2 2 datasets
ChIP hESC GSE29422.SMAD2.hESC 159 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 242 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 138 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 166 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 247 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 152 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 76 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 283 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 283 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 267 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 281 bp overlap
SMARCC1 4 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 256 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 283 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 283 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 250 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 232 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 162 bp overlap
ChIP hESC GSE18292.SOX2.hESC 144 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 283 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 144 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 201 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 283 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 283 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 283 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 188 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap