chr18 : 4,076,960 – 4,077,927
967 bp 70 TFs 0 linked genes
This 967 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:4,071,960 – 4,082,927
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 517 bp overlap
ChIP GM12878 ENCFF037PYH 517 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 550 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 179 bp overlap
BCL11A 1 dataset
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 113 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 258 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 179 bp overlap
Bcl11B 2 datasets
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 597 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 520 bp overlap
DUX4 2 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 268 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 265 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR841NDX.ELF1.GM12878 330 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 421 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF039QRE 351 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_36h DE_36h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_48h DE_48h-ETV5FIGLA_MA1945.2 14 bp overlap
FOXA1 7 datasets
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 117 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 98 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 239 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 245 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 214 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 131 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 238 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 822 bp overlap
ChIP DE DE-FOXA2-2 967 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 230 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 157 bp overlap
Foxq1 1 dataset
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 728 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 556 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 309 bp overlap
HIC2 2 datasets
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
Motif DE_48h DE_48h-HIC2_MA0738.2 6 bp overlap
HNF4A 1 dataset
Motif DE_48h DE_48h-HNF4A_MA1494.2 14 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 461 bp overlap
ChIP GM12878 ENCFF824TGK 361 bp overlap
ChIP GM12878 ENCFF824TGK 349 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 193 bp overlap
ChIP GM12878 ENCFF918AID 150 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 375 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 487 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 150 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 228 bp overlap
Lhx3 2 datasets
Motif DE_36h DE_36h-Lhx3_MA0135.2 12 bp overlap
Motif DE_48h DE_48h-Lhx3_MA0135.2 12 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 306 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA1639.2 9 bp overlap
Motif DE_48h DE_48h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_36h DE_36h-MEIS2_MA1640.2 9 bp overlap
Motif DE_48h DE_48h-MEIS2_MA1640.2 9 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 383 bp overlap
MSANTD3 2 datasets
Motif DE_36h DE_36h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_48h DE_48h-MSANTD3_MA1523.2 7 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 294 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 783 bp overlap
MXI1 2 datasets
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
Motif DE_48h DE_48h-MXI1_MA1108.3 6 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 107 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 591 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 410 bp overlap
NFATC3 1 dataset
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 489 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif DE_48h DE_48h-NR1H4RXRA_MA1146.2 13 bp overlap
NR2C2 2 datasets
Motif DE_36h DE_36h-NR2C2_MA0504.2 14 bp overlap
Motif DE_48h DE_48h-NR2C2_MA0504.2 14 bp overlap
NR2F1 4 datasets
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
Motif DE_48h DE_48h-NR2F1_MA1537.2 13 bp overlap
ChIP GM12878 ENCFF273VKX 289 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 640 bp overlap
Nr2e1 2 datasets
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_48h DE_48h-Nr2e1_MA0676.1 9 bp overlap
PBX3 2 datasets
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
Motif DE_48h DE_48h-PBX3_MA1114.2 11 bp overlap
PKNOX1 3 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 313 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 225 bp overlap
RAD21 2 datasets
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 305 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 554 bp overlap
RELA 1 dataset
ChIP GM12878 ENCSR664POU.RELA.GM12878 200 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 177 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 799 bp overlap
SMAD2 2 datasets
Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap
Motif DE_48h DE_48h-SMAD2_MA1964.2 6 bp overlap
SOX12 1 dataset
Motif DE_48h DE_48h-SOX12_MA1561.2 10 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 365 bp overlap
STAT1 1 dataset
Motif DE_48h DE_48h-STAT1_MA0137.4 9 bp overlap
Stat4 1 dataset
Motif DE_48h DE_48h-Stat4_MA0518.2 10 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 871 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 503 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 658 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCFF433DMU 341 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 83 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 145 bp overlap
THAP1 4 datasets
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Motif DE_36h DE_36h-THAP1_MA0597.3 8 bp overlap
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
THRA 1 dataset
Motif DE_48h DE_48h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_36h DE_36h-THRB_MA1574.2 13 bp overlap
Motif DE_48h DE_48h-THRB_MA1574.2 13 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 590 bp overlap
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 575 bp overlap
Wt1 2 datasets
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
ZNF16 2 datasets
Motif DE_36h DE_36h-ZNF16_MA1654.2 21 bp overlap
Motif DE_48h DE_48h-ZNF16_MA1654.2 21 bp overlap
ZNF207 1 dataset
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 389 bp overlap
ZNF217 1 dataset
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 349 bp overlap
ZNF274 2 datasets
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
ZNF416 2 datasets
Motif DE_36h DE_36h-ZNF416_MA1979.2 10 bp overlap
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF652 1 dataset
Motif DE_48h DE_48h-ZNF652_MA1657.2 9 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCSR859FDL.ZNF687.GM12878 229 bp overlap
ZNF740 2 datasets
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
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