Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

63 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 268 bp overlap

Arnt 1 dataset

Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap

BRD1 1 dataset

ChIP HUES-64 GSE104059.BRD1.HUES-64 244 bp overlap

CEBPD 1 dataset

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

CREB1 1 dataset

ChIP WTC11 ENCFF297VCI 211 bp overlap

E2F5 1 dataset

ChIP WTC11 ENCFF449LLF 268 bp overlap

E2F6 4 datasets

ChIP H1 ENCFF785DWK 224 bp overlap

ChIP K-562 ENCSR000BLI.E2F6.K-562 193 bp overlap

ChIP K562 ENCFF136LTS 213 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 268 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

EZH2 10 datasets

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 191 bp overlap

ChIP A-673 ENCSR179SAO.EZH2.A-673 215 bp overlap

ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 268 bp overlap

ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 204 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 105 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 62 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 159 bp overlap

ChIP hepatocyte ENCFF552DZB 216 bp overlap

ChIP hepatocyte ENCFF552DZB 268 bp overlap

ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 187 bp overlap

FOXK1 1 dataset

ChIP WTC11 ENCFF875IGU 251 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

HDAC2 1 dataset

ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 97 bp overlap

HES2 1 dataset

Motif DE_12h DE_12h-HES2_MA0616.3 9 bp overlap

HES5 1 dataset

Motif DE_12h DE_12h-HES5_MA0821.2 10 bp overlap

HEY1 1 dataset

Motif DE_12h DE_12h-HEY1_MA0823.1 10 bp overlap

HEY2 1 dataset

Motif DE_12h DE_12h-HEY2_MA0649.2 9 bp overlap

HIF1A 1 dataset

Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap

HOXB4 1 dataset

Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap

HOXC4 1 dataset

Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap

HOXD4 1 dataset

Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap

IRF3 1 dataset

Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 119 bp overlap

L3MBTL2 3 datasets

ChIP HEK293T ENCFF482NJV 268 bp overlap

ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 131 bp overlap

ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 142 bp overlap

MAX 8 datasets

Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap

ChIP H1 ENCFF601FOM 198 bp overlap

ChIP H1 ENCFF914VQY 199 bp overlap

ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 148 bp overlap

ChIP K562 ENCFF524IJO 107 bp overlap

ChIP NCI-H128 GSE41105.MAX.NCI-H128 237 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 215 bp overlap

ChIP WTC11 ENCFF223QFY 268 bp overlap

MAX::MYC 1 dataset

Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap

MEIS1 1 dataset

Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap

MLX 1 dataset

Motif DE_12h DE_12h-MLX_MA0663.1 10 bp overlap

MLXIPL 1 dataset

Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 268 bp overlap

MYC 1 dataset

Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap

MYCN 3 datasets

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 198 bp overlap

Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap

ChIP Kelly GSE94782.MYCN.Kelly 117 bp overlap

Mlxip 1 dataset

Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap

NANOG 1 dataset

ChIP HUES-8 GSE109524.NANOG.HUES-8 268 bp overlap

NKX6-1 1 dataset

Motif DE_24h DE_24h-NKX6-1_MA0674.2 7 bp overlap

Npas2 1 dataset

Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap

POU3F1 1 dataset

Motif DE_24h DE_24h-POU3F1_MA0786.2 10 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 168 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 172 bp overlap

RNF2 6 datasets

ChIP H1 ENCFF239FFS 183 bp overlap

ChIP H1 ENCFF239FFS 268 bp overlap

ChIP WA01 ENCSR784VUY.RNF2.WA01 268 bp overlap

ChIP WA01 GSE104690.RNF2.WA01 167 bp overlap

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 228 bp overlap

ChIP fibroblast GSE139053.RNF2.fibroblast 268 bp overlap

SIN3A 1 dataset

ChIP WA01 ENCSR000EBO.SIN3A.WA01 177 bp overlap

SIX4 1 dataset

ChIP WTC11 ENCFF891HYW 236 bp overlap

SMAD3 2 datasets

ChIP WTC11 ENCFF815YYQ 262 bp overlap

ChIP WTC11 ENCFF815YYQ 156 bp overlap

SMARCA4 2 datasets

ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 195 bp overlap

ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 188 bp overlap

SOHLH2 1 dataset

Motif DE_12h DE_12h-SOHLH2_MA1560.2 8 bp overlap

SS18 2 datasets

ChIP SYO-1 GSE108025.SS18.SYO-1 268 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 179 bp overlap

SUZ12 1 dataset

ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 208 bp overlap

Stat4 1 dataset

Motif DE_24h DE_24h-Stat4_MA0518.2 10 bp overlap

TBX20 1 dataset

Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 79 bp overlap

TGIF2 1 dataset

ChIP WTC11 ENCFF649SHI 268 bp overlap

USF1 3 datasets

ChIP H1 ENCFF090WVU 186 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 178 bp overlap

ChIP WTC11 ENCFF699QGS 268 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 262 bp overlap

ZKSCAN8 1 dataset

ChIP WTC11 ENCFF666HNJ 201 bp overlap

ZNF281 1 dataset

ChIP WTC11 ENCFF551GAV 268 bp overlap

ZNF343 1 dataset

Motif DE_24h DE_24h-ZNF343_MA1711.2 16 bp overlap

ZNF532 1 dataset

ChIP WTC11 ENCFF373VBX 111 bp overlap

ZNF770 1 dataset

Motif DE_24h DE_24h-ZNF770_MA2099.1 8 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
SNTG2		857 bp	At TSS	Proximity
SNTG2-AS1		970 bp	At TSS	Proximity

Genome Browser