chr17 : 73,957,265 73,957,981
716 bp 92 TFs 0 linked genes
This 716 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:73,952,265 – 73,962,981
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 122 bp overlap
Arid3b 1 dataset
Motif DE_72h DE_72h-Arid3b_MA0601.2 7 bp overlap
BRD4 4 datasets
ChIP COLO-205 GSE73319.BRD4.COLO-205 221 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 195 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 161 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 154 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
CTCF 6 datasets
ChIP B cell ENCFF500PZO 55 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 80 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 162 bp overlap
ChIP RWPE2 ENCFF911IEE 75 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 245 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 216 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EBF1 1 dataset
Motif DE_72h DE_72h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_72h DE_72h-EBF3_MA1637.2 9 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 97 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 247 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 261 bp overlap
ESR1 6 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 140 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 248 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 338 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 206 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 146 bp overlap
ChIP T-47D-B_E2_R5020 GSE80358.ESR1.T-47D-B_E2_R5020 119 bp overlap
EZH2 4 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 624 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 95 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 323 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 254 bp overlap
Ebf2 1 dataset
Motif DE_72h DE_72h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_72h DE_72h-Ebf4_MA2122.1 11 bp overlap
FOXA1 2 datasets
Motif DE_72h DE_72h-FOXA1_MA0148.5 8 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 199 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 115 bp overlap
ChIP DE DE-FOXA2-1 437 bp overlap
ChIP DE DE-FOXA2-2 343 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 156 bp overlap
FOXO6 1 dataset
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
FOXP1 2 datasets
ChIP WTC11 ENCFF338WGC 88 bp overlap
ChIP WTC11 ENCFF338WGC 429 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 284 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 403 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 289 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 161 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 146 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 573 bp overlap
ChIP DE DE-GATA4-2 550 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 246 bp overlap
ChIP KATO-III GSE51705.GATA4.KATO-III 187 bp overlap
ChIP foregut GSE117136.GATA4.foregut 514 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 480 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 454 bp overlap
GATA6 14 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 491 bp overlap
ChIP DE DE-GATA6-2 495 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 448 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 281 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 125 bp overlap
ChIP KATO-III GSE51705.GATA6.KATO-III 254 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 285 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 149 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 502 bp overlap
ChIP foregut GSE117136.GATA6.foregut 530 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 301 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 482 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 221 bp overlap
GFI1 1 dataset
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 276 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 321 bp overlap
GLIS2 1 dataset
Motif DE_72h DE_72h-GLIS2_MA0736.1 14 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 338 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 486 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 183 bp overlap
HNF4A 4 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 563 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 120 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 94 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 462 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
KLF5 6 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 155 bp overlap
ChIP GP5D GSE51234.KLF5.GP5D 716 bp overlap
ChIP GP5D_SIRAD21 GSE51234.KLF5.GP5D_SIRAD21 544 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 204 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 133 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 141 bp overlap
Lhx3 1 dataset
Motif DE_72h DE_72h-Lhx3_MA0135.2 12 bp overlap
MECOM 1 dataset
ChIP SKH1_CEBPA-ER_E2 GSE102697.MECOM.SKH1_CEBPA-ER_E2 151 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 491 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 160 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 699 bp overlap
ChIP GP5D_SIRAD21 GSE51234.MYC.GP5D_SIRAD21 640 bp overlap
MYCN 1 dataset
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 145 bp overlap
MYF5 1 dataset
Motif DE_72h DE_72h-MYF5_MA1641.2 8 bp overlap
NEUROD1 3 datasets
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 156 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 159 bp overlap
Motif DE_72h DE_72h-NEUROD1_MA1109.2 8 bp overlap
NIPBL 2 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 643 bp overlap
ChIP GP5D_SIRAD21 GSE51234.NIPBL.GP5D_SIRAD21 522 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 52 bp overlap
Neurod2 2 datasets
Motif DE_72h DE_72h-Neurod2_MA0668.3 8 bp overlap
Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
Olig2 1 dataset
Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 59 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 61 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 328 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 138 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 82 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1619.2 8 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 254 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 228 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 122 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 592 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 396 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 306 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 145 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 300 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 170 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 254 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 350 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 278 bp overlap
SP5 1 dataset
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 291 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 169 bp overlap
TBX5 1 dataset
Motif DE_72h DE_72h-TBX5_MA0807.1 8 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 275 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 399 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1575.2 17 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 336 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 253 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 253 bp overlap
Tcf12 1 dataset
Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap
ZFP64 2 datasets
ChIP HEK293 GSE76494.ZFP64.HEK293 296 bp overlap
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 181 bp overlap
ZIC1 1 dataset
Motif DE_72h DE_72h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZIC5 1 dataset
Motif DE_72h DE_72h-ZIC5_MA1584.2 15 bp overlap
ZNF24 1 dataset
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF407 1 dataset
ChIP HepG2 ENCFF537FDC 138 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF652 2 datasets
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF766 1 dataset
Motif DE_72h DE_72h-ZNF766_MA2098.1 9 bp overlap
ZNF768 1 dataset
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_72h DE_72h-Zic2_MA1629.2 9 bp overlap