chr15 : 22,840,394 22,840,658
264 bp 68 TFs 1 linked gene
This 264 bp open chromatin element is linked to NIPA2 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NIPA2 1.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:22,835,394 – 22,845,658
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 183 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 133 bp overlap
BACH1 1 dataset
ChIP GM12878 ENCFF576UEQ 264 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 74 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 140 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 103 bp overlap
BHLHE40 5 datasets
ChIP GM12878 ENCFF010ZUU 176 bp overlap
ChIP GM12878 ENCFF521IZR 193 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 165 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 110 bp overlap
ChIP GM12878 ENCSR000DZJ.BHLHE40.GM12878 79 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 264 bp overlap
BRD4 3 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 236 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 190 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 201 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 127 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 56 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 54 bp overlap
ChIP GM12878 ENCFF681AJV 264 bp overlap
ChIP GM12878 ENCFF681AJV 264 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 125 bp overlap
ChIP GM12878 ENCFF813OXE 97 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 64 bp overlap
ChIP LCL GSE75503.EBF1.LCL 50 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF457KVR 51 bp overlap
EP300 1 dataset
ChIP GM12878 ENCFF039QRE 89 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 193 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 264 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 230 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 264 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 160 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 102 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF968WBH 124 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 77 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 251 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 156 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 76 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 51 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 112 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 197 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 221 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 100 bp overlap
KLF9 3 datasets
ChIP HEK293 ENCFF588INF 155 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 191 bp overlap
ChIP MCF-7 ENCFF618FCM 264 bp overlap
KMT2A 3 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 76 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 131 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 50 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 79 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 62 bp overlap
MED1 1 dataset
ChIP P493-6 GSE36354.MED1.P493-6 50 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 93 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCFF995GXC 264 bp overlap
MXI1 1 dataset
ChIP GM12878 ENCFF666NJR 146 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 63 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 264 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 81 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 68 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 104 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 85 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 136 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 65 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 264 bp overlap
ChIP HEK293 ENCFF016MNJ 215 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 148 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 91 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF521FXC 94 bp overlap
ChIP GM18505 ENCFF311CYB 107 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 89 bp overlap
ChIP K562 ENCFF047BLG 264 bp overlap
ChIP K562 ENCFF648YPL 88 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 264 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 98 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 133 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 264 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 188 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 56 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 55 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 62 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 142 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 97 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 134 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 152 bp overlap
TAF1 1 dataset
ChIP GM12878 ENCSR000BGS.TAF1.GM12878 121 bp overlap
TARDBP 2 datasets
ChIP GM12878 ENCFF866POT 254 bp overlap
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 71 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 192 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 229 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 115 bp overlap
TSHZ1 2 datasets
ChIP HEK293 ENCFF893BGV 123 bp overlap
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 109 bp overlap
USF2 2 datasets
ChIP GM12878 GSE97661.USF2.GM12878 98 bp overlap
ChIP GM12878 ENCSR000DZU.USF2.GM12878 51 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 75 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 127 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 264 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 73 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 245 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 151 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 113 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 264 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 264 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 264 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 264 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 70 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 98 bp overlap
ZNF770 3 datasets
ChIP HEK293 ENCFF468FCG 103 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 93 bp overlap
ChIP HepG2 ENCFF233UVH 264 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 53 bp overlap