chr1 : 230,984,377 230,984,616
239 bp 63 TFs 2 linked genes
This 239 bp open chromatin element is linked to ARV1 and TTC13 and is bound by 63 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ARV1 5.3 kb Proximal Proximity
TTC13 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:230,979,377 – 230,989,616
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 99 bp overlap
BCL6 1 dataset
ChIP K562 ENCFF501MST 142 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 88 bp overlap
BRD9 2 datasets
ChIP K-562 ENCSR177XCS.BRD9.K-562 110 bp overlap
ChIP K562 ENCFF480JXZ 182 bp overlap
CDC5L 2 datasets
ChIP K-562 ENCSR121PFY.CDC5L.K-562 159 bp overlap
ChIP K562 ENCFF644OMA 206 bp overlap
DDIT3 1 dataset
ChIP K562 ENCFF341NJI 171 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 171 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 203 bp overlap
FOXA1 2 datasets
ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 151 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 107 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 239 bp overlap
ChIP DE DE-FOXA2-2 239 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 223 bp overlap
FOXJ2 2 datasets
ChIP K562 ENCFF457GZC 153 bp overlap
ChIP K562 ENCFF457GZC 239 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 92 bp overlap
ChIP K562 ENCFF245WKP 171 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 127 bp overlap
ChIP DE DE-GATA4-2 239 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 178 bp overlap
ChIP DE DE-GATA6-2 239 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 239 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 201 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 192 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 58 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 236 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 217 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 239 bp overlap
GTF2E2 1 dataset
ChIP K562 ENCFF741URT 239 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 111 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 100 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 102 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 148 bp overlap
HLTF 1 dataset
ChIP K562 ENCFF783OCM 166 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 116 bp overlap
ChIP K562 ENCFF771OHZ 146 bp overlap
JUND 1 dataset
ChIP K562 ENCFF336RCR 158 bp overlap
LARP7 1 dataset
ChIP K562 ENCFF550RPP 173 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 138 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 111 bp overlap
ChIP K562 ENCFF074XRJ 177 bp overlap
MNT 1 dataset
ChIP K562 ENCFF342DNS 239 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 132 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 91 bp overlap
ChIP K-562 ENCSR113LAS.MTA2.K-562 83 bp overlap
ChIP K562 ENCFF441KCP 179 bp overlap
MYNN 1 dataset
ChIP HEK293 ENCSR707BNG.MYNN.HEK293 141 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 127 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 239 bp overlap
PHB2 1 dataset
ChIP K-562 ENCSR924GXX.PHB2.K-562 139 bp overlap
PHF20 1 dataset
ChIP K562 ENCFF436SIT 239 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 239 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 183 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 163 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 239 bp overlap
PYGO2 1 dataset
ChIP K562 ENCFF414HHT 192 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 116 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 225 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 239 bp overlap
SPI1 1 dataset
ChIP K-562 ENCSR000BGW.SPI1.K-562 114 bp overlap
TRIM24 1 dataset
ChIP K562 ENCFF284DKY 115 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 100 bp overlap
ZBTB9 1 dataset
ChIP K562 ENCFF233EFX 153 bp overlap
ZC3H8 1 dataset
ChIP K562 ENCFF462ENR 172 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 223 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 112 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 127 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 76 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR099NCH.ZNF24.K-562 154 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 121 bp overlap
ZNF354B 1 dataset
ChIP K562 ENCFF120AXZ 113 bp overlap
ZNF410 1 dataset
ChIP K-562 GSE97661.ZNF410.K-562 151 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR949NVY.ZNF639.K-562 125 bp overlap
ChIP K562 ENCFF267NLX 239 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 170 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 172 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 205 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 206 bp overlap