chr14 : 100,832,252 – 100,832,872
620 bp 73 TFs 4 linked genes
This 620 bp open chromatin element is linked to 4 target genes and is bound by 73 transcription factors.
Linked Genes
4 genes
Distance
Link type
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MEG3 825 bp At TSS Proximity
MIR493HG 3.4 kb Proximal Proximity
DLK1 105.5 kb Distal Multiome
ENSG00000230805 245.2 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:100,827,252 – 100,837,872
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 454 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 512 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 281 bp overlap
Ar 1 dataset
Motif DE_72h DE_72h-Ar_MA0007.4 16 bp overlap
Arid3a 1 dataset
Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 394 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 443 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 395 bp overlap
BRD4 8 datasets
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 444 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 161 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 227 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 286 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 242 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 620 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 337 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 537 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 573 bp overlap
CTCF 11 datasets
ChIP H9 ENCFF152GTF 324 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 244 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 191 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 200 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 458 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 527 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 326 bp overlap
ChIP endodermal cell ENCFF471YCZ 326 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 476 bp overlap
ChIP neural progenitor cell ENCFF420RBO 320 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 208 bp overlap
CTCFL 2 datasets
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
Motif DE_72h DE_72h-CTCFL_MA1102.3 8 bp overlap
Dux 1 dataset
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 286 bp overlap
ELF1 1 dataset
Motif DE_72h DE_72h-ELF1_MA0473.4 9 bp overlap
ETV5::DRGX 1 dataset
Motif DE_72h DE_72h-ETV5DRGX_MA1944.2 12 bp overlap
EWSR1-FLI1 1 dataset
Motif DE_72h DE_72h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 5 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 527 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 271 bp overlap
ChIP neural progenitor cell ENCFF018MKA 510 bp overlap
ChIP neural progenitor cell ENCFF018MKA 260 bp overlap
ChIP neural progenitor cell ENCFF472NFV 529 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 438 bp overlap
ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 366 bp overlap
FLI1::DRGX 1 dataset
Motif DE_72h DE_72h-FLI1DRGX_MA1949.2 14 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 479 bp overlap
ChIP DE DE-FOXA2-2 386 bp overlap
GABPA 1 dataset
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 533 bp overlap
ChIP DE DE-GATA4-2 620 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 436 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 402 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 562 bp overlap
ChIP DE DE-GATA6-2 581 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 434 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 319 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 512 bp overlap
ChIP foregut GSE117136.GATA6.foregut 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 361 bp overlap
GLIS2 1 dataset
Motif DE_72h DE_72h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
Motif DE_72h DE_72h-GLIS3_MA0737.1 14 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
Ikzf3 1 dataset
Motif DE_72h DE_72h-Ikzf3_MA1992.2 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap
JUN 2 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 110 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 264 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
MAZ 1 dataset
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 239 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 469 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 459 bp overlap
NR2C2 1 dataset
Motif DE_72h DE_72h-NR2C2_MA0504.2 14 bp overlap
Nr2F6 1 dataset
Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 94 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 425 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 444 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 529 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 201 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 240 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 345 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 265 bp overlap
Pparg::Rxra 1 dataset
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 358 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 489 bp overlap
RARA 1 dataset
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
RORB 1 dataset
Motif DE_72h DE_72h-RORB_MA1150.2 10 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
Rarb 1 dataset
Motif DE_72h DE_72h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 430 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 430 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 620 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 412 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 620 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 279 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 382 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 118 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 620 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 179 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 220 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 548 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 78 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 620 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 165 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPDEF 1 dataset
Motif DE_72h DE_72h-SPDEF_MA0686.2 10 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 197 bp overlap
Stat2 1 dataset
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1574.2 13 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 262 bp overlap
Wt1 1 dataset
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZNF148 1 dataset
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF24 1 dataset
Motif DE_72h DE_72h-ZNF24_MA1124.1 13 bp overlap
ZNF281 1 dataset
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
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