chr13 : 51,230,351 51,230,956
605 bp 66 TFs 1 linked gene
This 605 bp open chromatin element is linked to FAM124A and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FAM124A 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:51,225,351 – 51,235,956
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 237 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 286 bp overlap
BRD4 1 dataset
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 144 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 324 bp overlap
CDK8 2 datasets
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 140 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 117 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 207 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 342 bp overlap
CTCF 11 datasets
ChIP dorsolateral prefrontal cortex ENCFF149PUN 448 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 320 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 292 bp overlap
ChIP gastroesophageal-sphincter ENCSR661XNQ.CTCF.gastroesophageal-sphincter 443 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 459 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 201 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 460 bp overlap
ChIP heart left ventricle ENCFF185CKY 387 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 190 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 380 bp overlap
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 202 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 251 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 228 bp overlap
EP300 7 datasets
ChIP gastroesophageal sphincter ENCFF211FPL 251 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 275 bp overlap
ChIP sigmoid colon ENCFF524QSR 271 bp overlap
ChIP sigmoid colon ENCFF682PXQ 231 bp overlap
ChIP sigmoid colon ENCFF890VSY 241 bp overlap
ChIP tibial nerve ENCFF346AYA 224 bp overlap
ChIP transverse colon ENCFF258CAS 241 bp overlap
ERG 4 datasets
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 143 bp overlap
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 205 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 281 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 121 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 239 bp overlap
ETS1 10 datasets
ChIP HUVEC-C GSE41166.ETS1.HUVEC-C 245 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 328 bp overlap
ChIP HUVEC-C_1h GSE93030.ETS1.HUVEC-C_1h 281 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 321 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 335 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 328 bp overlap
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 313 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.ETS1.HUVEC-C_VEGF_1h 281 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 344 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 321 bp overlap
EZH2 6 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 468 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 211 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 231 bp overlap
ChIP keratinocyte ENCFF070STK 348 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 205 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 396 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 231 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 107 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 159 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 333 bp overlap
ChIP DE DE-FOXA2-2 293 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 282 bp overlap
ChIP DE DE-GATA4-2 469 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 217 bp overlap
ChIP DE DE-GATA6-2 432 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 314 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 508 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 574 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 326 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 560 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 557 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 249 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 353 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 194 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 262 bp overlap
IRF1 4 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 228 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 286 bp overlap
ChIP CD14_LPS GSE43036.IRF1.CD14_LPS 202 bp overlap
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 156 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 306 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 306 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 368 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 269 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 222 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 371 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE83671.KMT2A.MV4-11 191 bp overlap
MAX 1 dataset
ChIP liver ENCFF584QGB 432 bp overlap
MED12 1 dataset
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 176 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 224 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 110 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 554 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 492 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 156 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 259 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 153 bp overlap
NR2F2 3 datasets
ChIP liver ENCFF565JGD 491 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 348 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 210 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 334 bp overlap
PCGF2 1 dataset
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 152 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 459 bp overlap
POLR2A 21 datasets
ChIP adrenal gland ENCFF843OBJ 440 bp overlap
ChIP breast epithelium ENCFF960NNA 431 bp overlap
ChIP esophagus muscularis mucosa ENCFF432ZCY 247 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 231 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 211 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 429 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 429 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 271 bp overlap
ChIP prostate gland ENCFF881OMH 417 bp overlap
ChIP sigmoid colon ENCFF101ILL 193 bp overlap
ChIP sigmoid colon ENCFF725QFT 441 bp overlap
ChIP sigmoid colon ENCFF748YVT 473 bp overlap
ChIP sigmoid colon ENCFF754JQR 290 bp overlap
ChIP spleen ENCFF044PYR 114 bp overlap
ChIP stomach ENCFF278MYS 241 bp overlap
ChIP stomach ENCFF607ZPU 325 bp overlap
ChIP stomach ENCFF820WZN 220 bp overlap
ChIP transverse colon ENCFF607LKE 221 bp overlap
ChIP transverse colon ENCFF610RWV 243 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
ChIP vagina ENCFF305NWS 150 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 259 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 173 bp overlap
RAD21 2 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 160 bp overlap
ChIP liver ENCFF522JHE 401 bp overlap
RELA 32 datasets
ChIP HAEC GSE89970.RELA.HAEC 156 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 160 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 286 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 312 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 386 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 324 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 343 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 497 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 400 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 409 bp overlap
ChIP aortic-endothelial-cell_IL1B_D24 GSE139377.RELA.aortic-endothelial-cell_IL1B_D24 276 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 370 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 405 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 289 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 213 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 276 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 315 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 253 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 322 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 349 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 587 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 325 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 368 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 524 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 275 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 280 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 299 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 451 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 310 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 337 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 441 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 259 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 415 bp overlap
RUNX1 1 dataset
ChIP CD34_ADULT GSE70660.RUNX1.CD34_ADULT 170 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 465 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 341 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 251 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 216 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 313 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 361 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 284 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 437 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 229 bp overlap
SMC1 2 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 265 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.SMC1.monocyte_IFNg-LPS 187 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 186 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 475 bp overlap
ChIP liver ENCFF769YSM 511 bp overlap
SPI1 2 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 220 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 126 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 217 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 186 bp overlap
STAT3 6 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 381 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 285 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 191 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 207 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 183 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 103 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 528 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 309 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 221 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 171 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 93 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 391 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 138 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 159 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 143 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 82 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 203 bp overlap