chr13 : 50,133,395 – 50,133,996
601 bp 78 TFs 1 linked gene
This 601 bp open chromatin element is linked to ENSG00000274270 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000274270 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:50,128,395 – 50,138,996
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 350 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 283 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 372 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ARID1A 1 dataset
ChIP H9 GSE139260.ARID1A.H9 266 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 601 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 264 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 214 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 80 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 361 bp overlap
BRD4 7 datasets
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 601 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 463 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 428 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 311 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 419 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 333 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 451 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 225 bp overlap
ChIP ME-1 GSE46044.CBFB.ME-1 214 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 190 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 234 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 199 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 223 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 561 bp overlap
CTCF 3 datasets
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 120 bp overlap
ChIP endodermal cell ENCFF471YCZ 51 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 252 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 177 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 251 bp overlap
ChIP BLaER1 ENCFF460KDD 157 bp overlap
ChIP BLaER1 ENCFF460KDD 181 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 136 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 163 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 379 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 290 bp overlap
ESR1 12 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 518 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 209 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 185 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 157 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 233 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 373 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 216 bp overlap
ChIP MCF-7_estradiol-aldosterone_4h GSE99626.ESR1.MCF-7_estradiol-aldosterone_4h 117 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 321 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 121 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 139 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 514 bp overlap
ESR1_Y537S 1 dataset
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 272 bp overlap
EZH2 10 datasets
ChIP B cell ENCFF803EMO 227 bp overlap
ChIP GM23338 ENCFF613YON 348 bp overlap
ChIP GM23338 ENCFF886DXX 348 bp overlap
ChIP H1 ENCFF232NZA 601 bp overlap
ChIP hESC GSE113817.EZH2.hESC 439 bp overlap
ChIP hepatocyte ENCFF118DKH 300 bp overlap
ChIP hepatocyte ENCFF118DKH 97 bp overlap
ChIP hepatocyte ENCFF552DZB 368 bp overlap
ChIP neural progenitor cell ENCFF018MKA 601 bp overlap
ChIP neural progenitor cell ENCFF472NFV 601 bp overlap
EZH2_phosphoT487 1 dataset
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 303 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 236 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 263 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GABPA 2 datasets
ChIP H1 ENCFF739QFD 341 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 230 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 201 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 539 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 101 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 233 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 601 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 586 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 283 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 559 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 507 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 116 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 308 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 512 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 395 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 242 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 361 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 302 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 292 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 168 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 469 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 527 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 529 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 546 bp overlap
PCBP1 1 dataset
ChIP K-562 ENCSR052PTN.PCBP1.K-562 189 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 340 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 195 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 157 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 586 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 344 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 528 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 465 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 285 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 309 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 143 bp overlap
RNF2 1 dataset
ChIP H1 ENCFF239FFS 359 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 601 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 543 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 200 bp overlap
SETDB1 1 dataset
ChIP K-562 ENCSR000EWI.SETDB1.K-562 184 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 159 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 580 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 474 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 493 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF507HGF 246 bp overlap
ChIP H1 ENCFF881NFR 601 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 601 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 373 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 358 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 125 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 601 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 394 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 170 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 218 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 517 bp overlap
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 363 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 138 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 156 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 316 bp overlap
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