chr12 : 88,855,715 88,856,315
600 bp 64 TFs 1 linked gene
This 600 bp open chromatin element is linked to ENSG00000289174 and is bound by 64 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289174 8.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:88,850,715 – 88,861,315
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
64 transcription factors
Source
Cell type
AHDC1 1 dataset
ChIP HepG2 ENCFF069FSH 170 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 187 bp overlap
ARID3A 3 datasets
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 77 bp overlap
ChIP HepG2 ENCFF122GLS 116 bp overlap
ChIP HepG2 ENCFF341DES 239 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 163 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 315 bp overlap
BRD4 1 dataset
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 142 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 62 bp overlap
CCAR2 2 datasets
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 201 bp overlap
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 200 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 87 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 94 bp overlap
CHD4 1 dataset
ChIP 501-mel GSE134848.CHD4.501-mel 239 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRC.CREB1.A-549 115 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 62 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 69 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 423 bp overlap
EP300 2 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 67 bp overlap
ChIP HepG2 ENCFF354ACD 132 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 50 bp overlap
FOXA1 4 datasets
ChIP HepG2 ENCFF207NVJ 122 bp overlap
ChIP HepG2 ENCFF740VZW 96 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 64 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 248 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 246 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 237 bp overlap
ChIP DE DE-FOXA2-1 566 bp overlap
ChIP DE DE-FOXA2-2 600 bp overlap
ChIP HepG2 ENCFF894AYY 143 bp overlap
FOXP1 2 datasets
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 107 bp overlap
ChIP HepG2 ENCFF823ERM 139 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 106 bp overlap
ChIP HepG2 ENCFF462ULY 231 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 160 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 600 bp overlap
ChIP DE DE-GATA4-2 600 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 600 bp overlap
ChIP DE DE-GATA6-2 600 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 341 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 599 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 433 bp overlap
HNF4A 5 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 79 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 71 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 58 bp overlap
ChIP HepG2 ENCFF669NAM 92 bp overlap
ChIP liver ENCFF354NRH 156 bp overlap
HOXA3 1 dataset
Motif DE_60h DE_60h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_60h DE_60h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_60h DE_60h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_60h DE_60h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_60h DE_60h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_60h DE_60h-HOXD4_MA1507.2 6 bp overlap
ISL2 1 dataset
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 68 bp overlap
JDP2 1 dataset
Motif DE_60h DE_60h-JDP2_MA0655.1 9 bp overlap
JUND 1 dataset
Motif DE_60h DE_60h-JUND_MA0491.3 9 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 118 bp overlap
LCORL 3 datasets
ChIP Hep-G2 ENCSR950NAZ.LCORL.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF017FTI 231 bp overlap
ChIP HepG2 ENCFF659AVU 148 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 272 bp overlap
MCRS1 1 dataset
ChIP Huh-7 GSE97411.MCRS1.Huh-7 265 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 511 bp overlap
MYBL2 2 datasets
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 69 bp overlap
ChIP HepG2 ENCFF176QIX 176 bp overlap
NCOA2 1 dataset
ChIP HepG2 ENCFF853BJJ 192 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 158 bp overlap
ChIP HepG2 ENCFF526NOJ 227 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 424 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 150 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 189 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 193 bp overlap
Rhox11 1 dataset
Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 178 bp overlap
SATB1 1 dataset
Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap
SKI 1 dataset
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 234 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 502 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 481 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 390 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 85 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 151 bp overlap
SOX6 3 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 186 bp overlap
ChIP HepG2 ENCFF767OCK 274 bp overlap
ChIP HepG2 ENCFF767OCK 74 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR000BJX.SP1.Hep-G2 74 bp overlap
TBX2 2 datasets
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 131 bp overlap
ChIP HepG2 ENCFF811TLA 290 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 63 bp overlap
ZNF710 1 dataset
ChIP HepG2 ENCFF170JWO 206 bp overlap
ZNF772 1 dataset
ChIP HepG2 ENCFF728OGE 149 bp overlap