chr12 : 76,013,999 76,014,388
389 bp 71 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 71 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:76,008,999 – 76,019,388
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 289 bp overlap
ATRX 2 datasets
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 303 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 333 bp overlap
BRD4 9 datasets
ChIP BE2C GSE80151.BRD4.BE2C 352 bp overlap
ChIP CLB-Ga GSE133453.BRD4.CLB-Ga 234 bp overlap
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 389 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 334 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 170 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 389 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 352 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 314 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 264 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 145 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 168 bp overlap
CDX2 3 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 191 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 277 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 206 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 322 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 315 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 244 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 115 bp overlap
CTNNB1 2 datasets
ChIP LS180 GSE31939.CTNNB1.LS180 155 bp overlap
ChIP LS180_125 GSE31939.CTNNB1.LS180_125 113 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 99 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 205 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 255 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 389 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 238 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH ENCFF394HLU 285 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 315 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 127 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 220 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 218 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 135 bp overlap
ChIP DE DE-FOXA2-1 252 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 348 bp overlap
GATA1 4 datasets
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 161 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 201 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 94 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 128 bp overlap
GATA2 5 datasets
ChIP SH-SY5Y ENCFF485YIB 335 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 389 bp overlap
ChIP SK-N-SH ENCFF764OZD 295 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 380 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 190 bp overlap
GATA3 11 datasets
ChIP BE2C GSE65664.GATA3.BE2C 353 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 324 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 351 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 332 bp overlap
ChIP NGP GSE65664.GATA3.NGP 297 bp overlap
ChIP SH-SY5Y ENCFF475HYF 279 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 356 bp overlap
ChIP SH-SY5Y GSE65664.GATA3.SH-SY5Y 317 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 376 bp overlap
ChIP SK-N-SH ENCFF040SSB 197 bp overlap
ChIP WA09 GSE105081.GATA3.WA09 148 bp overlap
GATA4 10 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 187 bp overlap
ChIP DE DE-GATA4-1 389 bp overlap
ChIP DE DE-GATA4-2 389 bp overlap
ChIP G296S GSE85628.GATA4.G296S 141 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 141 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 256 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 250 bp overlap
ChIP foregut GSE117136.GATA4.foregut 252 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 275 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 221 bp overlap
GATA6 19 datasets
ChIP AGS GSE51705.GATA6.AGS 254 bp overlap
ChIP AGS GSE51936.GATA6.AGS 144 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 241 bp overlap
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 357 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 329 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 335 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 389 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 311 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 334 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 143 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 389 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 312 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 335 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 291 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 225 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH ENCFF370MHZ 267 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 389 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 389 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 389 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 141 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 100 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 183 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 389 bp overlap
ChIP SK-N-SH ENCFF285GEQ 272 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 153 bp overlap
KDM1A 2 datasets
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 279 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 351 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 328 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 352 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 168 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 176 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 374 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 269 bp overlap
MYCN 9 datasets
ChIP BE2C GSE80151.MYCN.BE2C 309 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 389 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 389 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 267 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 389 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 331 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 288 bp overlap
ChIP NGP GSE80151.MYCN.NGP 234 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 220 bp overlap
ONECUT2 1 dataset
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 90 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 191 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 167 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 358 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 366 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 270 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 389 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 355 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 275 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 232 bp overlap
RAD21 2 datasets
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 263 bp overlap
RARA 1 dataset
ChIP SK-N-SH GSE69119.RARA.SK-N-SH 270 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 293 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 371 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 363 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 203 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 364 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 389 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 389 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 375 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 389 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 389 bp overlap
SS18 1 dataset
ChIP NGP_ARID1A-mut1 GSE134626.SS18.NGP_ARID1A-mut1 249 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 186 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 389 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 389 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 179 bp overlap
TCF4 3 datasets
ChIP LS180_125 GSE31939.TCF4.LS180_125 72 bp overlap
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 256 bp overlap
ChIP SK-N-SH ENCFF270OWF 319 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 388 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 388 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 151 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 290 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 319 bp overlap
TOX2 2 datasets
ChIP SK-N-SH ENCFF415OYE 268 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR226NRS.TOX2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 271 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 266 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 250 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 360 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 360 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 254 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 389 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 122 bp overlap