chr11 : 128,903,341 128,903,606
265 bp 68 TFs 1 linked gene
This 265 bp open chromatin element is linked to KCNJ5-AS1 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
KCNJ5-AS1 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:128,898,341 – 128,908,606
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 217 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 213 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 253 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 155 bp overlap
BRD4 6 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 155 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 155 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 265 bp overlap
ChIP SW480 GSE73319.BRD4.SW480 265 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 265 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 139 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 183 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 153 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 165 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 260 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 88 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 265 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 160 bp overlap
EGR1 2 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 189 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 203 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 92 bp overlap
EZH2 3 datasets
ChIP H1 ENCFF232NZA 265 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 265 bp overlap
ChIP neural progenitor cell ENCFF472NFV 265 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 145 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 145 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 182 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 202 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 220 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 212 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 141 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 265 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 242 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 235 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 265 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 176 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 127 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 186 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 157 bp overlap
ChIP RH4 GSE83726.MED1.RH4 150 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 120 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 265 bp overlap
MYOD1 9 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 265 bp overlap
ChIP RD GSE137168.MYOD1.RD 169 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 265 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 265 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 265 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 169 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 143 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 56 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 87 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 265 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 198 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 265 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 249 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 152 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 240 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 261 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 265 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 126 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 170 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 265 bp overlap
RELA 2 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 265 bp overlap
ChIP SW480_16h_TNFa GSE102796.RELA.SW480_16h_TNFa 265 bp overlap
RFX1 1 dataset
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
RFX3 1 dataset
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
RFX5 1 dataset
Motif DE_12h DE_12h-RFX5_MA0510.3 14 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 191 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 169 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 83 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 147 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 265 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 174 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 253 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 265 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 244 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 163 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 148 bp overlap
SNAI2 2 datasets
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 121 bp overlap
ChIP keratinocyte_LacZ_DIFF GSE55421.SNAI2.keratinocyte_LacZ_DIFF 108 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SUZ12 2 datasets
ChIP H1 ENCFF507HGF 222 bp overlap
ChIP H1 ENCFF881NFR 265 bp overlap
TBX5 5 datasets
ChIP G296S GSE85628.TBX5.G296S 229 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 229 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 265 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 265 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 253 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 231 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 265 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 225 bp overlap
ChIP Ishikawa ENCFF772OTG 253 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 176 bp overlap
TFAP4 1 dataset
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 60 bp overlap
TP53 3 datasets
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 183 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 153 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 265 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 62 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 235 bp overlap
ZNF410 1 dataset
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF8 1 dataset
Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap
ZSCAN29 1 dataset
Motif DE_12h DE_12h-ZSCAN29_MA1602.2 11 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap