chr10 : 24,953,515 – 24,953,715
200 bp 65 TFs 3 linked genes
This 200 bp open chromatin element is linked to ENSG00000273107, PRTFDC1, and ENSG00000285859 and is bound by 65 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000273107 275 bp At TSS Proximity
PRTFDC1 931 bp At TSS Proximity
ENSG00000285859 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:24,948,515 – 24,958,715
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
65 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 63 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 181 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 113 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 61 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF674KTF 200 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 51 bp overlap
BRD2 1 dataset
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 75 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 162 bp overlap
BRD4 7 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 200 bp overlap
ChIP CHL-1_BAY123897 GSE95585.BRD4.CHL-1_BAY123897 200 bp overlap
ChIP CHL-1_OTX015 GSE95585.BRD4.CHL-1_OTX015 200 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 200 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 185 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 145 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 200 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 56 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 167 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 200 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 160 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 200 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 200 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCFF105ZMI 98 bp overlap
FOSL1 1 dataset
ChIP MNNG-HOS GSE74230.FOSL1.MNNG-HOS 109 bp overlap
GATA6 1 dataset
ChIP OACP4-C GSE132680.GATA6.OACP4-C 60 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 66 bp overlap
GRHL2 4 datasets
ChIP HBE GSE46194.GRHL2.HBE 67 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 123 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 135 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 82 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 200 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 95 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 170 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 200 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 200 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCFF238LYK 200 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 200 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 200 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
L3MBTL2 2 datasets
ChIP K562 ENCFF320EQC 200 bp overlap
ChIP K562 ENCFF320EQC 137 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 88 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 114 bp overlap
ChIP K562 ENCFF140CEX 84 bp overlap
MLLT1 2 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 107 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 62 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 143 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 199 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 200 bp overlap
POLR2A 9 datasets
ChIP K562 ENCFF836GHX 52 bp overlap
ChIP K562 ENCFF836GHX 200 bp overlap
ChIP breast epithelium ENCFF045XXN 124 bp overlap
ChIP breast epithelium ENCFF045XXN 200 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 148 bp overlap
ChIP esophagus squamous epithelium ENCFF297FPP 56 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 89 bp overlap
ChIP gastroesophageal sphincter ENCFF238INU 58 bp overlap
ChIP uterus ENCFF208ADI 59 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 200 bp overlap
RAD51 1 dataset
ChIP K-562 ENCSR524BUE.RAD51.K-562 70 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 91 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 200 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 191 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 143 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 135 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 200 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 169 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 81 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 154 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 148 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 54 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 57 bp overlap
STAT3 1 dataset
ChIP A-137 GSE85579.STAT3.A-137 101 bp overlap
SUZ12 1 dataset
ChIP H1 ENCFF881NFR 78 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 123 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 91 bp overlap
TEAD4 1 dataset
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 81 bp overlap
TP63 2 datasets
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 182 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 175 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 69 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 50 bp overlap
YY1 1 dataset
ChIP ALL GSE145549.YY1.ALL 75 bp overlap
YY1AP1 1 dataset
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 58 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 162 bp overlap
ChIP K562 ENCFF427SDV 70 bp overlap
ChIP K562 ENCFF875HLX 71 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 160 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 200 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 77 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCFF799ATK 182 bp overlap
ZNF639 2 datasets
ChIP K562 ENCFF271FQR 200 bp overlap
ChIP K562 ENCFF271FQR 200 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 104 bp overlap
ZSCAN29 3 datasets
ChIP K-562 ENCSR175SZH.ZSCAN29.K-562 200 bp overlap
ChIP K562 ENCFF797SOU 200 bp overlap
ChIP K562 ENCFF797SOU 159 bp overlap
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