chr10 : 5,416,686 – 5,417,229

543 bp 74 TFs 1 linked gene

This 543 bp open chromatin element is linked to NET1 and is bound by 74 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
NET1		4.1 kb	Proximal	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

74 transcription factors

AGO1 1 dataset

ChIP Hep-G2 GSE120104.AGO1.Hep-G2 56 bp overlap

ASCL1 2 datasets

ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 136 bp overlap

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 157 bp overlap

ASH2L 2 datasets

ChIP H1 ENCFF399KAM 181 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 451 bp overlap

Ahr::Arnt 1 dataset

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

Atf1 1 dataset

Motif DE_12h DE_12h-Atf1_MA0604.1 8 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap

BACH1 1 dataset

Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap

BARX2 1 dataset

Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap

BHLHE22 2 datasets

ChIP CAL-1 GSE43876.BHLHE22.CAL-1 156 bp overlap

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

BRD4 4 datasets

ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 193 bp overlap

ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 58 bp overlap

ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 215 bp overlap

ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 254 bp overlap

CBFA2T3 1 dataset

ChIP Kasumi-1 GSE126953.CBFA2T3.Kasumi-1 160 bp overlap

CREB1 3 datasets

ChIP GM23338 ENCFF432ZEW 211 bp overlap

ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 140 bp overlap

ChIP WA01 ENCSR000BSN.CREB1.WA01 139 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF274GAT 435 bp overlap

EP300 3 datasets

ChIP AML GSE131939.EP300.AML 153 bp overlap

ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 144 bp overlap

ChIP Kasumi-1 GSE115115.EP300.Kasumi-1 161 bp overlap

ERG 1 dataset

ChIP SKNO-1 GSE23730.ERG.SKNO-1 247 bp overlap

ESR1_Y537S 1 dataset

ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 122 bp overlap

FLI1 1 dataset

ChIP SKNO-1 GSE23730.FLI1.SKNO-1 260 bp overlap

FOSL1::JUN 1 dataset

Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 64 bp overlap

GSPT2 1 dataset

ChIP HEK293T GSE35197.GSPT2.HEK293T 133 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 218 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

JMJD1C 1 dataset

ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 233 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 170 bp overlap

JUN::JUNB 1 dataset

Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap

JUND 1 dataset

ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 132 bp overlap

KAT2A 1 dataset

ChIP AML_shaml1-eto GSE131939.KAT2A.AML_shaml1-eto 104 bp overlap

KDM1A 1 dataset

ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 114 bp overlap

LDB1 2 datasets

ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 265 bp overlap

ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 259 bp overlap

LMO2 3 datasets

ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 114 bp overlap

ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 198 bp overlap

ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 231 bp overlap

LYL1 1 dataset

ChIP Kasumi-1 GSE63484.LYL1.Kasumi-1 265 bp overlap

MAX 3 datasets

ChIP H1 ENCFF914VQY 239 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 543 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 543 bp overlap

MED1 2 datasets

ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 142 bp overlap

ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 237 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MYC 4 datasets

ChIP NCI-H128 GSE41105.MYC.NCI-H128 167 bp overlap

ChIP NCI-H128 GSE41105.MYC.NCI-H128 274 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 83 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 381 bp overlap

MYCN 1 dataset

ChIP CHP-134 GSE129588.MYCN.CHP-134 346 bp overlap

NEUROD1 2 datasets

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 377 bp overlap

Motif DE_12h DE_12h-NEUROD1_MA1109.2 8 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap

NR4A1 1 dataset

ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 139 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA0668.3 8 bp overlap

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

ONECUT1 1 dataset

ChIP liver ERP002306.ONECUT1.liver 156 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

POLR2A 1 dataset

ChIP gastroesophageal sphincter ENCFF070PCA 295 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

RBBP5 2 datasets

ChIP H1 ENCFF905HFL 406 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 200 bp overlap

RBFOX2 4 datasets

ChIP K-562 ENCSR822LBD.RBFOX2.K-562 137 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 134 bp overlap

ChIP K562 ENCFF967GRF 443 bp overlap

ChIP K562 ENCFF967GRF 234 bp overlap

RBM22 1 dataset

ChIP K-562 GSE120104.RBM22.K-562 108 bp overlap

RUNX1 1 dataset

ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 208 bp overlap

RUNX1T1 4 datasets

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 381 bp overlap

ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 241 bp overlap

ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 237 bp overlap

ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 182 bp overlap

SAP30 2 datasets

ChIP H1 ENCFF149IOE 284 bp overlap

ChIP WA01 ENCSR000ATR.SAP30.WA01 198 bp overlap

SIN3A 5 datasets

ChIP H1 ENCFF042ZSL 304 bp overlap

ChIP H1 ENCFF042ZSL 101 bp overlap

ChIP H1 ENCFF896IJG 198 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 155 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 125 bp overlap

SIX1 1 dataset

Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap

SMAD2-3 1 dataset

ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 122 bp overlap

SMARCA4 2 datasets

ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 166 bp overlap

ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 178 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SPI1 1 dataset

ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 216 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Six4 1 dataset

Motif DE_12h DE_12h-Six4_MA2001.2 7 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

TBP 3 datasets

ChIP H1 ENCFF859IIO 199 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 81 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 58 bp overlap

TCF12 3 datasets

ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 267 bp overlap

ChIP Kasumi-1 GSE43834.TCF12.Kasumi-1 263 bp overlap

ChIP Kasumi-1 GSE114644.TCF12.Kasumi-1 251 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 526 bp overlap

TCF4 1 dataset

ChIP CAL-1 GSE76147.TCF4.CAL-1 223 bp overlap

TFAP4 1 dataset

ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 314 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

ZBTB17 1 dataset

Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap

ZBTB33 1 dataset

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 413 bp overlap

ZEB1 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 172 bp overlap

ZNF317 1 dataset

Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap

ZNF891 1 dataset

ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 131 bp overlap