chr9 : 81,772,128 81,772,799
671 bp 89 TFs 0 linked genes
This 671 bp open chromatin element has no linked target genes and is bound by 89 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:81,767,128 – 81,777,799
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 464 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 478 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 383 bp overlap
BCL6 1 dataset
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
BRD2 8 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 419 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 427 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 298 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 298 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD2.MDA-MB-231_JQ1 358 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_rDNA 372 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 447 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 447 bp overlap
BRD4 9 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 487 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 487 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 321 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 365 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 444 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 444 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 321 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 460 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 460 bp overlap
BRD9 4 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 466 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD9.MDA-MB-231_JQ1 321 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 434 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 469 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 307 bp overlap
DMRT3 1 dataset
Motif DE_60h DE_60h-DMRT3_MA0610.2 7 bp overlap
DUX4 7 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 194 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 411 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 363 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 187 bp overlap
FOS 1 dataset
ChIP endothelial cell of umbilical vein ENCFF415XBG 121 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 390 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 426 bp overlap
Motif DE_60h DE_60h-FOXA1_MA0148.5 8 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 339 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 266 bp overlap
FOXA2 8 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 268 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 432 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 359 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 159 bp overlap
ChIP DE DE-FOXA2-1 630 bp overlap
ChIP DE DE-FOXA2-2 671 bp overlap
Motif DE_60h DE_60h-FOXA2_MA0047.4 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 331 bp overlap
FOXA3 1 dataset
Motif DE_60h DE_60h-FOXA3_MA1683.2 7 bp overlap
FOXC2 2 datasets
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_60h DE_60h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
FOXE1 2 datasets
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_60h DE_60h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_60h DE_60h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_60h DE_60h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_60h DE_60h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_60h DE_60h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_60h DE_60h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_60h DE_60h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_60h DE_60h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_60h DE_60h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_60h DE_60h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_60h DE_60h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_60h DE_60h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_60h DE_60h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap
GATA1 3 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA2 1 dataset
ChIP HUVEC-C_VEGF_1h GSE109625.GATA2.HUVEC-C_VEGF_1h 160 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 472 bp overlap
ChIP DE DE-GATA4-2 671 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 175 bp overlap
ChIP foregut GSE117136.GATA4.foregut 476 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 367 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 273 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 192 bp overlap
ChIP DE DE-GATA6-1 482 bp overlap
ChIP DE DE-GATA6-2 671 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 512 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 266 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 428 bp overlap
ChIP foregut GSE117136.GATA6.foregut 415 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 320 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 307 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 293 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 359 bp overlap
HNF1A 1 dataset
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
IRF4 1 dataset
Motif DE_60h DE_60h-IRF4_MA1419.2 14 bp overlap
IRF8 1 dataset
Motif DE_60h DE_60h-IRF8_MA0652.2 13 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 119 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 411 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 394 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 195 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 448 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 343 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 533 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 271 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 165 bp overlap
PHOX2A 3 datasets
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 3 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
RELA 5 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 331 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 370 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 426 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 388 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 324 bp overlap
Rfx6 1 dataset
Motif DE_60h DE_60h-Rfx6_MA1724.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 383 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 151 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 380 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 230 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 63 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 118 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 349 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 458 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 330 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 296 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 210 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 669 bp overlap
SOX18 1 dataset
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231 GSE104760.SOX4.MDA-MB-231 200 bp overlap
SOX8 1 dataset
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
SPDEF 1 dataset
ChIP A-549 GSE86957.SPDEF.A-549 188 bp overlap
SPI1 9 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 234 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 158 bp overlap
ChIP HL-60 ENCFF645GBT 271 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 162 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 143 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 132 bp overlap
ChIP monocyte_MACROPHAGE GSE31621.SPI1.monocyte_MACROPHAGE 187 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 114 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 134 bp overlap
SRY 1 dataset
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 207 bp overlap
STAT1 1 dataset
Motif DE_60h DE_60h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 202 bp overlap
Six3 1 dataset
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
Stat4 1 dataset
Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 294 bp overlap
TEAD4 6 datasets
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 146 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 394 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 280 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 360 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 171 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 175 bp overlap
TFAP2C 1 dataset
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 157 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 204 bp overlap
YAP1 1 dataset
ChIP MDA-MB-231 GSE66081.YAP1.MDA-MB-231 380 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 306 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 188 bp overlap
ZNF214 3 datasets
Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap
Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap
Motif DE_72h DE_72h-ZNF214_MA1975.2 13 bp overlap
ZNF324 3 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
Motif DE_72h DE_72h-ZNF324_MA1977.2 14 bp overlap