chr1 : 18,637,687 18,637,964
277 bp 68 TFs 1 linked gene
This 277 bp open chromatin element is linked to PAX7 and is bound by 68 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PAX7 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:18,632,687 – 18,642,964
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
68 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 244 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 92 bp overlap
BRD4 3 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 202 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 191 bp overlap
ChIP thyroid-cancer GSE114068.BRD4.thyroid-cancer 277 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 217 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 277 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 77 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 204 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 265 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 277 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 129 bp overlap
CTBP2 1 dataset
ChIP H1 ENCFF329MAX 277 bp overlap
CTCF 1 dataset
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 248 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 215 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 210 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 277 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 125 bp overlap
EZH2 21 datasets
ChIP GM23338 ENCFF613YON 124 bp overlap
ChIP H1 ENCFF232NZA 277 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 187 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 277 bp overlap
ChIP PC-3 ENCFF928VSN 216 bp overlap
ChIP PC-3 ENCFF928VSN 183 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 277 bp overlap
ChIP T98G GSE112240.EZH2.T98G 277 bp overlap
ChIP astrocyte ENCFF365JTP 187 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 99 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 149 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 82 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 175 bp overlap
ChIP hepatocyte ENCFF118DKH 231 bp overlap
ChIP hepatocyte ENCFF552DZB 277 bp overlap
ChIP keratinocyte ENCFF070STK 239 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 61 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 242 bp overlap
ChIP neural progenitor cell ENCFF018MKA 277 bp overlap
ChIP neural progenitor cell ENCFF472NFV 277 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 238 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 253 bp overlap
GATA6 2 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 277 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 248 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 277 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 229 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 277 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 222 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 203 bp overlap
JARID2 3 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 277 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 277 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 277 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 277 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 277 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 103 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 277 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 124 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 168 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 277 bp overlap
NANOG 3 datasets
ChIP WA01 ERP004238.NANOG.WA01 204 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 128 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 277 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 277 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 277 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 277 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 277 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 277 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 209 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 250 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 277 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 187 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 277 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 277 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 201 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 206 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 273 bp overlap
RNF2 2 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 106 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 72 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 277 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 277 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 251 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 223 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 129 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 142 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 188 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 243 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 277 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 277 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 277 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 277 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 194 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 277 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 277 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 277 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 84 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 136 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 277 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 270 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 232 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 204 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 277 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 277 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 236 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 243 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 203 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 114 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 277 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 277 bp overlap
SS18 3 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 277 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 223 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 230 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 277 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 223 bp overlap
SUZ12 8 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 277 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 277 bp overlap
ChIP H1 ENCFF881NFR 277 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 277 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 240 bp overlap
ChIP NT2/D1 ENCFF574SXS 194 bp overlap
ChIP NT2/D1 ENCFF574SXS 277 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 235 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 251 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 247 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 234 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 274 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 244 bp overlap
TET2 1 dataset
ChIP Jurkat_RUNX1KD GSE85524.TET2.Jurkat_RUNX1KD 216 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 277 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 238 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 271 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 218 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 277 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 277 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 277 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 270 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 236 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 277 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 277 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 240 bp overlap