chr9 : 79,974,870 – 79,975,461
591 bp 90 TFs 1 linked gene
This 591 bp open chromatin element is linked to ENSG00000280366 and is bound by 90 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000280366 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:79,969,870 – 79,980,461
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 18 datasets
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 133 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 154 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 313 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 174 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 176 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 150 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 181 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 204 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 505 bp overlap
ChIP prostate GSE65478.AR.prostate 319 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 139 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 113 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 276 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 142 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 174 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 76 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 269 bp overlap
ASH2L 2 datasets
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 225 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 293 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 240 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 225 bp overlap
BRD4 4 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 200 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 118 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 176 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 239 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 311 bp overlap
CREB1 3 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 382 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 478 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 127 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 230 bp overlap
ERG 10 datasets
ChIP VCaP GSE28950.ERG.VCaP 295 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 223 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 230 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 303 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 202 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 239 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 240 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 110 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 250 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 243 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 218 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 515 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 315 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 377 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 134 bp overlap
ETV1 1 dataset
ChIP MDA-Pca-2b GSE106624.ETV1.MDA-Pca-2b 134 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXA1 7 datasets
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 332 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 470 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 236 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 136 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 181 bp overlap
ChIP prostate_P29_T GSE130408.FOXA1.prostate_P29_T 171 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 157 bp overlap
GABPA 3 datasets
ChIP VCaP GSE49091.GABPA.VCaP 203 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 255 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 250 bp overlap
HIF1A 1 dataset
ChIP RCC10 GSE101063.HIF1A.RCC10 162 bp overlap
HOXB13 8 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 59 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 194 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 191 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 260 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 186 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 181 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 276 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 149 bp overlap
Hand1::Tcf3 1 dataset
Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap
Hnf1A 2 datasets
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
Motif ES_0h ES_0h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Motif ES_0h ES_0h-IRF3_MA1418.2 17 bp overlap
KDM4A 2 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 188 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 256 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 373 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 292 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
MYBL2 1 dataset
Motif DE_12h DE_12h-MYBL2_MA0777.1 15 bp overlap
MYCN 1 dataset
ChIP 22Rv1_intact GSE117304.MYCN.22Rv1_intact 288 bp overlap
NANOG 3 datasets
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 212 bp overlap
ChIP LNCaP_pNanog8_Dox GSE74799.NANOG.LNCaP_pNanog8_Dox 226 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 3 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
NR5A1 2 datasets
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Motif ES_0h ES_0h-NR5A1_MA1540.3 12 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 133 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 1 dataset
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Prdm15 2 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif ES_0h ES_0h-Prdm15_MA1616.2 11 bp overlap
Prdm5 1 dataset
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 162 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 183 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif ES_0h ES_0h-RORA_MA0071.1 10 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 433 bp overlap
SIX5 2 datasets
ChIP H1 ENCFF942SOJ 237 bp overlap
ChIP WA01 ENCSR000BIQ.SIX5.WA01 144 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT1::STAT2 2 datasets
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
STAT3 4 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 210 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 373 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 131 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Motif ES_0h ES_0h-TCF7L2_MA0523.2 9 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZNF143 8 datasets
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 429 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 385 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 174 bp overlap
ChIP WA09 GSE105028.ZNF143.WA09 441 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 481 bp overlap
ChIP WTC11 ENCFF249JUK 485 bp overlap
ZNF189 2 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF416 2 datasets
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap
ZNF528 3 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF707 2 datasets
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
ZNF76 2 datasets
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap
Huangfu Lab · Publications · Resources · Contact