chr8 : 25,003,563 – 25,003,851
288 bp 75 TFs 1 linked gene
This 288 bp open chromatin element is linked to ENSG00000288055 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000288055 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:24,998,563 – 25,008,851
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
BACH1 4 datasets
ChIP A-549 ENCSR043EHG.BACH1.A-549 132 bp overlap
ChIP H1 ENCFF282VDB 246 bp overlap
ChIP SW1990 GSE124406.BACH1.SW1990 212 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 206 bp overlap
BRD2 3 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 288 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 235 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 180 bp overlap
BRD4 4 datasets
ChIP HeLa GSE151038.BRD4.HeLa 288 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 288 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 288 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 200 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 114 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 92 bp overlap
CDK9 1 dataset
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 118 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 265 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 171 bp overlap
CREB5 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 67 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 178 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 273 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
EP300 1 dataset
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 145 bp overlap
EZH2 3 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 288 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 288 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 288 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 140 bp overlap
FOS 7 datasets
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 128 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 153 bp overlap
ChIP leiomyoma_PT1063 GSE128230.FOS.leiomyoma_PT1063 56 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 176 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 164 bp overlap
ChIP myometrium_PT916 GSE128230.FOS.myometrium_PT916 69 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 91 bp overlap
FOSL2 5 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 187 bp overlap
ChIP A549 ENCFF195CES 243 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 203 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 263 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 244 bp overlap
GTF2F1 1 dataset
ChIP HeLa-S3 ENCSR000ECZ.GTF2F1.HeLa-S3 130 bp overlap
HMBOX1 1 dataset
Motif DE_12h DE_12h-HMBOX1_MA0895.2 7 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA4 1 dataset
Motif DE_12h DE_12h-HOXA4_MA1496.2 7 bp overlap
HOXA5 1 dataset
Motif DE_12h DE_12h-HOXA5_MA0158.2 8 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 270 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 266 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 237 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 288 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 288 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 288 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 141 bp overlap
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 61 bp overlap
ChIP myometrium_PT916 GSE128230.JUN.myometrium_PT916 123 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 58 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 184 bp overlap
MAFK 3 datasets
ChIP A549 ENCFF371EPR 262 bp overlap
ChIP H1 ENCFF854XWE 209 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 179 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 210 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 168 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 288 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 153 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 145 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 202 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 288 bp overlap
MYCN 4 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 166 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 140 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 176 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 166 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFE2 5 datasets
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 237 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 146 bp overlap
ChIP K562 ENCFF047YKA 282 bp overlap
ChIP K562 ENCFF163BSI 196 bp overlap
NFE2L2 4 datasets
ChIP A-549 GSE113497.NFE2L2.A-549 165 bp overlap
ChIP HeLa-S3 ENCSR707IUN.NFE2L2.HeLa-S3 162 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 119 bp overlap
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 114 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
ONECUT2 1 dataset
ChIP A-549 GSE102599.ONECUT2.A-549 96 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 86 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 240 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 186 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 243 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 85 bp overlap
RBPJ 3 datasets
ChIP GIC GSE79734.RBPJ.GIC 175 bp overlap
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 77 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 241 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 258 bp overlap
SMARCA2 4 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 201 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 288 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 257 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 288 bp overlap
SMARCA4 20 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 142 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 137 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 77 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 125 bp overlap
ChIP A-549_AG15690 GSE132290.SMARCA4.A-549_AG15690 81 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 153 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 158 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 137 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 142 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 150 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 246 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 288 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 288 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 288 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 223 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 278 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 235 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 262 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 224 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 184 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 206 bp overlap
SOX2 10 datasets
ChIP HCC2814 GSE137459.SOX2.HCC2814 169 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 237 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 230 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 235 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 246 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 288 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 171 bp overlap
ChIP TT GSE46837.SOX2.TT 192 bp overlap
ChIP glioma_stem GSE67282.SOX2.glioma_stem 200 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 207 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 194 bp overlap
SUZ12 1 dataset
ChIP hiPSC_WT GSE124903.SUZ12.hiPSC_WT 118 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 288 bp overlap
TP53 1 dataset
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 155 bp overlap
TP63 1 dataset
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 70 bp overlap
TWIST1 3 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 202 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 187 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 202 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 60 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 288 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 288 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 181 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 128 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 288 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 158 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 229 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 288 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 203 bp overlap
ChIP HEK293 ENCFF236OPX 288 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 288 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 229 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 246 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 181 bp overlap
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