chr7 : 138,945,169 138,945,519
350 bp 108 TFs 0 linked genes
This 350 bp open chromatin element has no linked target genes and is bound by 108 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:138,940,169 – 138,950,519
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 135 bp overlap
ASCL1 5 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 185 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 247 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 183 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 178 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 181 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 321 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 350 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 65 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 324 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 311 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 331 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 336 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 281 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 279 bp overlap
DMRTA1 2 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_24h DE_24h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_24h DE_24h-DMRTA2_MA1478.2 6 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 329 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 172 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 169 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 101 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 102 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 88 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 335 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 206 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 299 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 164 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 213 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 239 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 236 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 169 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 289 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 350 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 313 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_24h DE_24h-MGAEVX1_MA1960.2 11 bp overlap
MSANTD3 2 datasets
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_24h DE_24h-MSANTD3_MA1523.2 7 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
MYF6 1 dataset
Motif DE_12h DE_12h-MYF6_MA0667.1 10 bp overlap
MYOD1 3 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 137 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 229 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 320 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 163 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 288 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 186 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 249 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 213 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 274 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 199 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NR1I2 1 dataset
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 320 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 350 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 98 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 343 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 289 bp overlap
PPARG 2 datasets
Motif DE_12h DE_12h-PPARG_MA0066.2 19 bp overlap
Motif DE_24h DE_24h-PPARG_MA0066.2 19 bp overlap
PROX1 2 datasets
Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap
Motif DE_24h DE_24h-PROX1_MA0794.1 12 bp overlap
Ptf1A 4 datasets
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RELA 1 dataset
ChIP HeLa-B2_GRKD_DMSO GSE24518.RELA.HeLa-B2_GRKD_DMSO 140 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 288 bp overlap
RUNX1 1 dataset
ChIP K-562 ENCSR588AKU.RUNX1.K-562 138 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 287 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 310 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 269 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 209 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 250 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
STAT3 4 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
Motif DE_24h DE_24h-STAT3_MA0144.3 9 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 240 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 221 bp overlap
TBR1 2 datasets
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX2 2 datasets
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX21 2 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 112 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif DE_24h DE_24h-TCF4_MA0830.3 8 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
Tbx6 2 datasets
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_12h DE_12h-Tcf21_MA0832.2 10 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 183 bp overlap
ZEB1 4 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 132 bp overlap
ZFP14 4 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 350 bp overlap
ZNF214 2 datasets
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
Motif DE_24h DE_24h-ZNF214_MA1975.2 13 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 185 bp overlap
ZNF669 2 datasets
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
Motif DE_24h DE_24h-ZNF669_MA1985.1 15 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZSCAN16 2 datasets
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Motif DE_24h DE_24h-ZSCAN16_MA2100.1 18 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap