chr7 : 90,928,717 90,929,116
399 bp 77 TFs 0 linked genes
This 399 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:90,923,717 – 90,934,116
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 127 bp overlap
BRD4 4 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 51 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 77 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 70 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 204 bp overlap
CTCF 80 datasets
ChIP 22Rv1 ENCFF466OXN 249 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 269 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 125 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 152 bp overlap
ChIP A549 ENCFF034FVO 279 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP A549 ENCFF434LUY 237 bp overlap
ChIP A673 ENCFF123WOM 323 bp overlap
ChIP B cell ENCFF500PZO 399 bp overlap
ChIP C4-2B ENCFF821XVN 399 bp overlap
ChIP C4-2B ENCFF821XVN 255 bp overlap
ChIP Caco-2 ENCFF753NZV 319 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 111 bp overlap
ChIP Calu3 ENCFF526MDS 322 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP GM06990 ENCFF471OQT 258 bp overlap
ChIP GM10266 ENCFF241YYF 177 bp overlap
ChIP GM12865 ENCFF067GFI 231 bp overlap
ChIP GM12873 ENCFF711LOS 247 bp overlap
ChIP GM13976 ENCFF896BYT 161 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM23338 ENCFF531QOI 305 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 399 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 206 bp overlap
ChIP H1 ENCFF764RHO 254 bp overlap
ChIP H9 ENCFF152GTF 259 bp overlap
ChIP HCT116 ENCFF003KHP 131 bp overlap
ChIP HCT116 ENCFF209YMI 261 bp overlap
ChIP HEK293 ENCFF498RMM 239 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 113 bp overlap
ChIP HepG2 ENCFF127KUP 215 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 294 bp overlap
ChIP KMS-11 ENCFF853JKX 399 bp overlap
ChIP LNCAP ENCFF223HIG 321 bp overlap
ChIP LNCAP ENCFF700QXT 319 bp overlap
ChIP MCF-7 ENCFF139NQI 236 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 224 bp overlap
ChIP MCF-7 ENCFF210JUZ 234 bp overlap
ChIP MCF-7 ENCFF414SZG 92 bp overlap
ChIP MCF-7 ENCFF424NQR 83 bp overlap
ChIP MCF-7 ENCFF494VXA 103 bp overlap
ChIP MCF-7 ENCFF844STM 100 bp overlap
ChIP MCF-7 ENCFF954TUV 96 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 187 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 161 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 168 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 145 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 171 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 148 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 146 bp overlap
ChIP NCI-H929 ENCFF305JAB 174 bp overlap
ChIP NCI-H929 ENCFF305JAB 378 bp overlap
ChIP OCI-LY1 ENCFF455ESK 151 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 143 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 185 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 293 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 311 bp overlap
ChIP Panc1 ENCFF056JQX 399 bp overlap
ChIP RWPE2 ENCFF911IEE 399 bp overlap
ChIP SK-N-SH ENCFF575DMG 335 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 398 bp overlap
ChIP VCaP ENCFF858YQT 253 bp overlap
ChIP VCaP ENCFF858YQT 399 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 236 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 249 bp overlap
ChIP endodermal cell ENCFF471YCZ 235 bp overlap
ChIP hepatocyte ENCFF263BLJ 264 bp overlap
ChIP neural crest cell ENCFF182LWK 322 bp overlap
ChIP neural progenitor cell ENCFF420RBO 300 bp overlap
ChIP osteocyte ENCFF929FPD 353 bp overlap
ChIP placenta ENCFF029PHY 333 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 151 bp overlap
ChIP spleen ENCFF065CBS 398 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 363 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 334 bp overlap
ChIP BLaER1 ENCFF262VBH 255 bp overlap
ChIP BLaER1 ENCFF274GAT 115 bp overlap
ELF1 2 datasets
ChIP MCF-7 ENCFF305BNP 388 bp overlap
ChIP MCF-7 ENCFF687CWI 349 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif DE_36h DE_36h-Elf5_MA0136.4 8 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FOXA1 20 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 151 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 146 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF361KNY 285 bp overlap
ChIP MCF-7 ENCFF465LTH 226 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 191 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 288 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 127 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 133 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 217 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 215 bp overlap
ChIP MCF-7_DOX-neg GSE124654.FOXA1.MCF-7_DOX-neg 144 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 321 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 210 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 145 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 131 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 165 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 163 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 136 bp overlap
ChIP MCF-7_shNR2F2 GSE132432.FOXA1.MCF-7_shNR2F2 291 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 367 bp overlap
ChIP DE DE-FOXA2-2 399 bp overlap
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
ChIP HepG2 ENCFF533COJ 83 bp overlap
ChIP HepG2 ENCFF570ABM 107 bp overlap
ChIP HepG2 ENCFF894AYY 366 bp overlap
FOXA3 2 datasets
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
ChIP HepG2 ENCFF005KGL 361 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 360 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_36h DE_36h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 116 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
ChIP ESO-26 GSE132680.KLF5.ESO-26 270 bp overlap
KMT2A 1 dataset
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 96 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCFF169IXS 360 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 209 bp overlap
MNT 1 dataset
ChIP MCF-7 ENCFF144ZFZ 399 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 54 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PKNOX1 1 dataset
ChIP MCF-7 ENCFF116OCS 346 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF309IKZ 330 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 189 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP MCF-7 ENCFF724VCQ 245 bp overlap
RELA 7 datasets
ChIP 786-O GSE86092.RELA.786-O 115 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 176 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 197 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 189 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 199 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 175 bp overlap
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 110 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCFF437VFY 399 bp overlap
ChIP MCF-7 ENCFF521RDC 394 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT3 1 dataset
ChIP BT-474 GSE152203.STAT3.BT-474 179 bp overlap
Sox11 1 dataset
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 183 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 269 bp overlap
YY1 5 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 166 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 299 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 341 bp overlap
ChIP HepG2 ENCFF956MUY 377 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 202 bp overlap
ZBTB6 1 dataset
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
ZHX2 1 dataset
ChIP MCF-7 ENCFF733XRY 399 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 158 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 162 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF217 1 dataset
ChIP MCF-7 ENCFF379OSU 364 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF682 1 dataset
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap