chr7 : 33,852,976 – 33,853,999
1,023 bp 71 TFs 1 linked gene
This 1.0 kb open chromatin element is linked to BMPER and is bound by 71 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
BMPER 52.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:33,847,976 – 33,858,999
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
ARNTL 3 datasets
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 239 bp overlap
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 323 bp overlap
ATF3 1 dataset
ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 121 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 285 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 300 bp overlap
BRD4 7 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 352 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 226 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 192 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 173 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 173 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 199 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 199 bp overlap
CDK8 1 dataset
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 70 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 240 bp overlap
CREBBP 2 datasets
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 300 bp overlap
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 192 bp overlap
EGR1 1 dataset
ChIP fibroblast_DOX-CLOB-24h GSE134924.EGR1.fibroblast_DOX-CLOB-24h 202 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 189 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 663 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF451CNG 302 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 256 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 193 bp overlap
ERF::FOXI1 2 datasets
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 319 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 460 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_36h DE_36h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 2 datasets
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 233 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 121 bp overlap
FOSL2 6 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 229 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 271 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 340 bp overlap
ChIP SK-N-SH ENCFF127ZDW 275 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 224 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 254 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 253 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 310 bp overlap
ChIP DE DE-FOXA2-1 832 bp overlap
ChIP DE DE-FOXA2-2 825 bp overlap
FOXL2 3 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 241 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 324 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 342 bp overlap
FOXM1 2 datasets
ChIP SK-N-SH ENCFF404RGX 428 bp overlap
ChIP SK-N-SH ENCFF404RGX 131 bp overlap
GATA2 3 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 234 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 365 bp overlap
GATA4 9 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 283 bp overlap
ChIP DE DE-GATA4-1 849 bp overlap
ChIP DE DE-GATA4-2 1004 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 190 bp overlap
ChIP foregut GSE117136.GATA4.foregut 477 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 660 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 302 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 154 bp overlap
ChIP DE DE-GATA6-1 817 bp overlap
ChIP DE DE-GATA6-2 1023 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 780 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 846 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 627 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 855 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 913 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 826 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 874 bp overlap
ChIP foregut GSE117136.GATA6.foregut 519 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 622 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 623 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 680 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 357 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 232 bp overlap
GRHL2 2 datasets
Motif DE_36h DE_36h-GRHL2_MA1105.3 8 bp overlap
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HMGB1 1 dataset
ChIP IMR-90 GSE98245.HMGB1.IMR-90 104 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 160 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 727 bp overlap
JUND 4 datasets
ChIP SK-N-SH ENCFF551NEQ 305 bp overlap
ChIP SK-N-SH ENCFF971JKN 287 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 236 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 192 bp overlap
MAX 1 dataset
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 126 bp overlap
MED1 4 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 391 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 269 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 372 bp overlap
ChIP myoblast GSE60026.MED1.myoblast 194 bp overlap
MED12 3 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 107 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 131 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 106 bp overlap
MYCN 1 dataset
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 118 bp overlap
Mecom 2 datasets
Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 295 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF427MRU 281 bp overlap
ChIP liver ENCFF565JGD 316 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 239 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 290 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 254 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 252 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 95 bp overlap
OSR2 2 datasets
Motif DE_36h DE_36h-OSR2_MA1646.2 8 bp overlap
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 282 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 237 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 139 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 253 bp overlap
Prdm5 2 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RAD21 2 datasets
ChIP IMR-90 ENCFF752PTH 232 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 240 bp overlap
RCOR1 2 datasets
ChIP IMR-90 ENCFF644MZN 292 bp overlap
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 225 bp overlap
RELA 3 datasets
Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
ChIP IMR-90_TNF GSE43070.RELA.IMR-90_TNF 263 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 134 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 758 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 701 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 766 bp overlap
SMAD3 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 191 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 130 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 110 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 279 bp overlap
SMARCB1 3 datasets
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 287 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 226 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 399 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 491 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 821 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 867 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 71 bp overlap
SS18-SSX 3 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 216 bp overlap
ChIP fibroblast_6aa GSE139053.SS18-SSX.fibroblast_6aa 219 bp overlap
ChIP fibroblast_7aa GSE139053.SS18-SSX.fibroblast_7aa 152 bp overlap
STAT3 3 datasets
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
Motif DE_60h DE_60h-STAT3_MA0144.3 9 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 297 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 209 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 299 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 329 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 237 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
USF1 4 datasets
ChIP SK-N-SH ENCFF967PDP 311 bp overlap
ChIP SK-N-SH ENCFF967PDP 110 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 186 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 140 bp overlap
USF2 2 datasets
ChIP IMR-90 ENCFF438KUN 114 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 215 bp overlap
ZNF135 2 datasets
Motif DE_36h DE_36h-ZNF135_MA1587.1 14 bp overlap
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF652 2 datasets
Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
Zfp809 2 datasets
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Motif DE_60h DE_60h-Zfp809_MA2125.1 9 bp overlap
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