chr7 : 27,030,239 27,030,738
499 bp 62 TFs 1 linked gene
This 499 bp open chromatin element is linked to SKAP2 and is bound by 62 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SKAP2 166.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:27,025,239 – 27,035,738
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
62 transcription factors
Source
Cell type
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 125 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 290 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 341 bp overlap
BCL11A 2 datasets
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 211 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 153 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 227 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 246 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 366 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 238 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 186 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 218 bp overlap
BRD4 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 219 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 258 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 198 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 248 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 298 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 189 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 301 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 202 bp overlap
ChIP hESC GSE17917.EP300.hESC 333 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 127 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 233 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 449 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 499 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 492 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 499 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 499 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 188 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 369 bp overlap
GLIS2 1 dataset
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 288 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 414 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF353UJQ 477 bp overlap
ChIP H1 ENCFF353UJQ 257 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 261 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 152 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 350 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 236 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 444 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 345 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 417 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 209 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 64 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 203 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 104 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 98 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 68 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 90 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 63 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 67 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 131 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 471 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 364 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 267 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 499 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 395 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 430 bp overlap
ChIP hESC GSE18292.NANOG.hESC 384 bp overlap
ChIP hESC GSE20650.NANOG.hESC 270 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 194 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 211 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 216 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 182 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 169 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 132 bp overlap
PGR 6 datasets
ChIP T-47D GSE31129.PGR.T-47D 119 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 88 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 89 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 105 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 85 bp overlap
ChIP T-47D_progesterone_siCtrl GSE132649.PGR.T-47D_progesterone_siCtrl 69 bp overlap
POU5F1 6 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 320 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 460 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 499 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 229 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 398 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 349 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 242 bp overlap
ChIP H1 ENCFF896IJG 122 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 127 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 100 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 439 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 499 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 481 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 442 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 444 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 226 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 437 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 333 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 256 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 317 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 484 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 405 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 414 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 348 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 194 bp overlap
SOX2 3 datasets
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hESC GSE18292.SOX2.hESC 217 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 300 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 231 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 214 bp overlap
SUZ12 1 dataset
ChIP hiPSC GSE124903.SUZ12.hiPSC 220 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 379 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 420 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 112 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 243 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 262 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 276 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 129 bp overlap
TP53 2 datasets
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 208 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 277 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 480 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 266 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 127 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 363 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 179 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 329 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 186 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 229 bp overlap