chr6 : 142,940,466 – 142,940,803
337 bp 67 TFs 2 linked genes
This 337 bp open chromatin element is linked to HIVEP2 and HIVEP2-DT and is bound by 67 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
HIVEP2 4.3 kb Proximal Proximity
HIVEP2-DT 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:142,935,466 – 142,945,803
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 337 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 220 bp overlap
BCL11A 3 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 63 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 114 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 133 bp overlap
BRD4 6 datasets
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 330 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 315 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 315 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 198 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 198 bp overlap
ChIP SEM GSE83671.BRD4.SEM 337 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 281 bp overlap
ChIP K562 ENCFF963TXY 334 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 337 bp overlap
ChIP K562 ENCFF673OEZ 324 bp overlap
CBX8 2 datasets
ChIP K-562 ENCSR000ATW.CBX8.K-562 68 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 131 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 166 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 156 bp overlap
CREBBP 1 dataset
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 168 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 337 bp overlap
EP300 1 dataset
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 146 bp overlap
ERG 19 datasets
ChIP HAEC GSE89970.ERG.HAEC 167 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 210 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 185 bp overlap
ChIP RWPE-1 GSE114241.ERG.RWPE-1 271 bp overlap
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 151 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 178 bp overlap
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 193 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 150 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 182 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 135 bp overlap
ChIP aortic-endothelial-cell_D38 GSE139377.ERG.aortic-endothelial-cell_D38 93 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 135 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 151 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 220 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 191 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 147 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 181 bp overlap
ChIP aortic-endothelial-cell_D53 GSE139377.ERG.aortic-endothelial-cell_D53 211 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 164 bp overlap
ESR2 2 datasets
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 154 bp overlap
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 118 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 267 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 185 bp overlap
FOS 4 datasets
ChIP IMR-90 ENCFF179EDA 233 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 181 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 254 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 233 bp overlap
FOXL2 5 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 206 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 173 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 184 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 264 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 264 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 238 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 307 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 307 bp overlap
GATA2 7 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 204 bp overlap
ChIP K562 ENCFF088XQT 332 bp overlap
ChIP K562 ENCFF544PCK 209 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 337 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 192 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 324 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 337 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 304 bp overlap
GATA6 1 dataset
ChIP AGS GSE51705.GATA6.AGS 248 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 162 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 280 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 134 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 214 bp overlap
HMG20A 1 dataset
ChIP K562 ENCFF840WDB 337 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 162 bp overlap
ID3 3 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 337 bp overlap
ChIP K562 ENCFF170RNI 337 bp overlap
ChIP K562 ENCFF170RNI 188 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 176 bp overlap
JUN 4 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 161 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 291 bp overlap
ChIP endothelial cell of umbilical vein ENCFF791BMV 208 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 211 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 213 bp overlap
KDM1A 5 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 239 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 277 bp overlap
ChIP K562 ENCFF128TYE 337 bp overlap
ChIP K562 ENCFF133OLU 337 bp overlap
ChIP K562 ENCFF934ZRG 337 bp overlap
KMT2A 4 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 168 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 66 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 337 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 177 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 337 bp overlap
MEN1 1 dataset
ChIP SEM GSE83671.MEN1.SEM 337 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 241 bp overlap
MYC 1 dataset
ChIP PAVE GSE47152.MYC.PAVE 181 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 85 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 122 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 307 bp overlap
ChIP K562 ENCFF004YPK 337 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 214 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 165 bp overlap
PKNOX1 1 dataset
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 127 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 318 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 196 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 183 bp overlap
RAD21 1 dataset
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 202 bp overlap
RELA 33 datasets
ChIP HAEC GSE89970.RELA.HAEC 166 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 313 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 211 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 221 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 334 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 202 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 222 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 209 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 222 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 281 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 229 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 266 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 210 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 185 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 150 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 321 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 151 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 225 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 255 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 243 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 274 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 186 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 115 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 156 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 215 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 171 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 155 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 208 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 172 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 249 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 258 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 317 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 274 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 158 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 204 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 288 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 289 bp overlap
STAT3 1 dataset
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 155 bp overlap
TAL1 9 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 263 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 247 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 283 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 239 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 335 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 282 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 280 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 266 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 253 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 291 bp overlap
ChIP K562 ENCFF931DJY 337 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 337 bp overlap
ChIP K562 ENCFF319QZT 337 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 337 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 309 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 251 bp overlap
TFEB 1 dataset
ChIP HUVEC-C GSE88894.TFEB.HUVEC-C 193 bp overlap
TP53 2 datasets
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 144 bp overlap
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 155 bp overlap
TP63 2 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 337 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 337 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 248 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 280 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 58 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 258 bp overlap
ChIP HEK293 ENCFF944VMC 337 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 196 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 231 bp overlap
Huangfu Lab · Publications · Resources · Contact