chr1 : 119,000,157 – 119,000,831
674 bp 66 TFs 2 linked genes
This 674 bp open chromatin element is linked to ENSG00000226172 and ENSG00000239216 and is bound by 66 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000226172 560 bp At TSS Proximity
ENSG00000239216 573 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:118,995,157 – 119,005,831
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 3 datasets
ChIP myofibroblast GSE90772.AR.myofibroblast 322 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 475 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 311 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 451 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 173 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 623 bp overlap
BRD2 2 datasets
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 427 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 402 bp overlap
BRD4 5 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 321 bp overlap
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 118 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 160 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 463 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 572 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 411 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 118 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 195 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 367 bp overlap
EGR1 7 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 289 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 178 bp overlap
ChIP K562 ENCFF006PJY 245 bp overlap
ChIP K562 ENCFF895KGN 385 bp overlap
ChIP T-HESCs GSE141063.EGR1.T-HESCs 391 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 151 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 197 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 315 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 174 bp overlap
ChIP SEM GSE117864.ERG.SEM 176 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE48930.ESR1.MCF-7 187 bp overlap
EZH2 25 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 525 bp overlap
ChIP A673 ENCFF790MVL 197 bp overlap
ChIP GM23338 ENCFF613YON 674 bp overlap
ChIP GM23338 ENCFF886DXX 618 bp overlap
ChIP H1 ENCFF232NZA 674 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 225 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 251 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 365 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 232 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 382 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 509 bp overlap
ChIP astrocyte ENCFF365JTP 103 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 674 bp overlap
ChIP fibroblast of lung ENCFF479BAW 451 bp overlap
ChIP fibroblast of lung ENCFF479BAW 139 bp overlap
ChIP hESC GSE113817.EZH2.hESC 566 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 422 bp overlap
ChIP hepatocyte ENCFF552DZB 476 bp overlap
ChIP hepatocyte ENCFF552DZB 418 bp overlap
ChIP keratinocyte ENCFF070STK 508 bp overlap
ChIP keratinocyte ENCFF070STK 112 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural cell ENCFF610EPB 286 bp overlap
ChIP neural progenitor cell ENCFF018MKA 674 bp overlap
ChIP neural progenitor cell ENCFF472NFV 674 bp overlap
EZH2_phosphoT487 2 datasets
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 496 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 611 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 137 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 305 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 206 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 199 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 419 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 291 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 367 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 483 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 672 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 670 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 619 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 170 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 86 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 66 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 356 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 419 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 245 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 139 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 494 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 163 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 302 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 297 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 203 bp overlap
POLR2A 2 datasets
ChIP lower leg skin ENCFF058ULB 247 bp overlap
ChIP lower leg skin ENCFF687RJC 247 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 572 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 217 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 365 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 603 bp overlap
RAD21 9 datasets
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 162 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 263 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 178 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 175 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 239 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 317 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 194 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.RAD21.THP-1_siCtrl-eGFP-Pam3csk-0h 243 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 362 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 189 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 587 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 665 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 233 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 272 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 198 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 258 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 395 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 355 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 135 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 250 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 227 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 99 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 302 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 666 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 205 bp overlap
SUZ12 6 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 588 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 674 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 170 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 674 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 670 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 203 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 184 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 273 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 426 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 255 bp overlap
UBTF 2 datasets
ChIP K-562 ENCSR000EFZ.UBTF.K-562 310 bp overlap
ChIP K-562 ENCSR000EFW.UBTF.K-562 164 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 271 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 525 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 105 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 131 bp overlap
ChIP K562 ENCFF352SDL 221 bp overlap
ZNF175 2 datasets
ChIP K562 ENCFF497AEJ 346 bp overlap
ChIP K562 ENCFF497AEJ 65 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 184 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap
ZNF891 1 dataset
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 251 bp overlap
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