chr6 : 82,249,708 – 82,250,214
506 bp 80 TFs 1 linked gene
This 506 bp open chromatin element is linked to IBTK and is bound by 80 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
IBTK 2.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:82,244,708 – 82,255,214
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP 12Z GSE129781.ARID1A.12Z 506 bp overlap
Ahr::Arnt 2 datasets
Motif DE_48h DE_48h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
Atf3 2 datasets
Motif DE_48h DE_48h-Atf3_MA1988.2 7 bp overlap
Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap
BACH1 2 datasets
Motif DE_48h DE_48h-BACH1_MA1633.2 9 bp overlap
Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap
BATF 2 datasets
Motif DE_48h DE_48h-BATF_MA1634.2 7 bp overlap
Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap
BATF3 2 datasets
Motif DE_48h DE_48h-BATF3_MA0835.3 7 bp overlap
Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 2 datasets
Motif DE_48h DE_48h-BATFJUN_MA0462.3 7 bp overlap
Motif DE_60h DE_60h-BATFJUN_MA0462.3 7 bp overlap
BNC2 5 datasets
Motif DE_48h DE_48h-BNC2_MA1928.2 7 bp overlap
Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap
ChIP SK-N-SH ENCFF174EMC 401 bp overlap
ChIP SK-N-SH ENCFF174EMC 180 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 191 bp overlap
Bach1::Mafk 1 dataset
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
CDX1 1 dataset
Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 333 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 236 bp overlap
CTBP2 1 dataset
ChIP MCF-7 GSE107013.CTBP2.MCF-7 225 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 131 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 196 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF451CNG 281 bp overlap
ChIP SK-N-SH ENCFF829RWA 343 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 376 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 181 bp overlap
ERF::FOXI1 1 dataset
Motif DE_60h DE_60h-ERFFOXI1_MA1935.2 10 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_48h DE_48h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
FEZF2 2 datasets
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 220 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 279 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
FOS 2 datasets
Motif DE_48h DE_48h-FOS_MA0476.2 8 bp overlap
Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap
FOSL1 2 datasets
Motif DE_48h DE_48h-FOSL1_MA0477.3 9 bp overlap
Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap
FOSL2 2 datasets
ChIP SK-N-SH ENCFF127ZDW 283 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 160 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 253 bp overlap
ChIP DE DE-FOXA2-1 427 bp overlap
FOXM1 2 datasets
ChIP SK-N-SH ENCFF404RGX 412 bp overlap
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 216 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
GATA2 5 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP ESF GSE108408.GATA2.ESF 230 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 200 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 258 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 307 bp overlap
GATA3 4 datasets
ChIP MCF-7 GSE133072.GATA3.MCF-7 190 bp overlap
ChIP MCF-7_E2 GSE29073.GATA3.MCF-7_E2 113 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 229 bp overlap
ChIP SK-N-SH ENCFF040SSB 319 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 506 bp overlap
ChIP DE DE-GATA4-2 506 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 354 bp overlap
ChIP foregut GSE117136.GATA4.foregut 272 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 325 bp overlap
GATA5 4 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 13 datasets
ChIP AGS GSE51705.GATA6.AGS 149 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 447 bp overlap
ChIP DE DE-GATA6-1 506 bp overlap
ChIP DE DE-GATA6-2 506 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 506 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 506 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 506 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 506 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 506 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 506 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 133 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 506 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HNF1A 1 dataset
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
HOXA10 1 dataset
Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap
Hmga1 1 dataset
Motif DE_60h DE_60h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 290 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 267 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 494 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 237 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 314 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 297 bp overlap
Jun 2 datasets
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
MEF2A 2 datasets
Motif DE_48h DE_48h-MEF2A_MA0052.5 10 bp overlap
Motif DE_60h DE_60h-MEF2A_MA0052.5 10 bp overlap
MEF2B 2 datasets
Motif DE_48h DE_48h-MEF2B_MA0660.1 12 bp overlap
Motif DE_60h DE_60h-MEF2B_MA0660.1 12 bp overlap
MEF2D 2 datasets
Motif DE_48h DE_48h-MEF2D_MA0773.1 12 bp overlap
Motif DE_60h DE_60h-MEF2D_MA0773.1 12 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap
MXI1 1 dataset
Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap
Mecom 3 datasets
Motif DE_48h DE_48h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 353 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 278 bp overlap
Nr2e1 1 dataset
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
ONECUT1 1 dataset
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
ONECUT3 1 dataset
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 313 bp overlap
PBX2 1 dataset
Motif DE_60h DE_60h-PBX2_MA1113.3 9 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 188 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 406 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 380 bp overlap
PHOX2B 1 dataset
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 363 bp overlap
PROP1 1 dataset
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
RXRA 2 datasets
ChIP SK-N-SH ENCFF893DLM 301 bp overlap
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 172 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 277 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 338 bp overlap
SMARCA4 5 datasets
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 54 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 282 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 323 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 194 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 275 bp overlap
SMARCC1 3 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 240 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 228 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 229 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 446 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 155 bp overlap
TEAD1 1 dataset
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 119 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 308 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 223 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB33 3 datasets
ChIP HepG2 ENCFF778UKV 274 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 312 bp overlap
ChIP K562 ENCFF875HLX 356 bp overlap
ZC3H10 1 dataset
ChIP SK-N-SH ENCFF465WAR 258 bp overlap
ZNF213 2 datasets
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 2 datasets
Motif DE_48h DE_48h-ZNF384_MA1125.2 8 bp overlap
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF652 1 dataset
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
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