chr6 : 43,469,183 43,469,538
355 bp 71 TFs 1 linked gene
This 355 bp open chromatin element is linked to TJAP1 and is bound by 71 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TJAP1 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:43,464,183 – 43,474,538
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
71 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 99 bp overlap
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 149 bp overlap
ChIP MCF-7 ERP001226.AR.MCF-7 116 bp overlap
ARID1A 4 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 224 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 243 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 355 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 198 bp overlap
ARID2 2 datasets
ChIP MCF-7_parental GSE123284.ARID2.MCF-7_parental 183 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ARID2.MCF-7_parental_4-hydroxytamoxifen 162 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 163 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 296 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 355 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 152 bp overlap
BRD2 2 datasets
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 320 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 201 bp overlap
BRD4 9 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 224 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 243 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 355 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 232 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 276 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 344 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 355 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 355 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 92 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 74 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 172 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 236 bp overlap
CTCF 4 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 111 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 188 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 203 bp overlap
ChIP keratinocyte_mut2 GSE123711.CTCF.keratinocyte_mut2 148 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 176 bp overlap
ChIP BLaER1 ENCFF335XTP 355 bp overlap
ChIP BLaER1 ENCFF364PUR 291 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 107 bp overlap
ChIP ProEs GSE59087.EED.ProEs 130 bp overlap
ERG 1 dataset
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 127 bp overlap
ESR1 24 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 341 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 53 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 68 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 165 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 116 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 101 bp overlap
ChIP MCF-7_EtOH GSE136673.ESR1.MCF-7_EtOH 203 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 214 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 238 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 139 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 186 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 58 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 111 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 101 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 155 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 79 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 303 bp overlap
ChIP MCF-7_shFbxo GSE119702.ESR1.MCF-7_shFbxo 172 bp overlap
ChIP MCF-7_shFbxo_E2 GSE119702.ESR1.MCF-7_shFbxo_E2 172 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 161 bp overlap
ChIP T-47D-B_R5020 GSE80358.ESR1.T-47D-B_R5020 207 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 140 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 191 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 202 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 174 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 173 bp overlap
FOXA1 6 datasets
ChIP MCF-7 ERP001226.FOXA1.MCF-7 135 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 86 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 158 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 78 bp overlap
ChIP MCF-7_JC4692 GSE126004.FOXA1.MCF-7_JC4692 84 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 82 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 206 bp overlap
ChIP foregut GSE117136.GATA4.foregut 122 bp overlap
GATA6 4 datasets
ChIP AGS GSE51936.GATA6.AGS 143 bp overlap
ChIP DE DE-GATA6-1 281 bp overlap
ChIP DE DE-GATA6-2 143 bp overlap
ChIP foregut GSE117136.GATA6.foregut 192 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 282 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 355 bp overlap
HOXB13 1 dataset
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 179 bp overlap
JUN 3 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 174 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 284 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 110 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 158 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 355 bp overlap
ChIP HEK293 ENCFF994GSG 228 bp overlap
MED1 3 datasets
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 319 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 196 bp overlap
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 74 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 135 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 101 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 152 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 276 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 103 bp overlap
NR3C1 2 datasets
ChIP HCC1937 GSE152203.NR3C1.HCC1937 106 bp overlap
ChIP MDA-MB-361 GSE152203.NR3C1.MDA-MB-361 98 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 179 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 117 bp overlap
POLR2A 3 datasets
ChIP prostate gland ENCFF881OMH 75 bp overlap
ChIP stomach ENCFF278MYS 106 bp overlap
ChIP stomach ENCFF820WZN 54 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 159 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 133 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 108 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 336 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 276 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 178 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 72 bp overlap
RELA 2 datasets
ChIP MCF-7_Veh GSE67295.RELA.MCF-7_Veh 147 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 168 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 175 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 252 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 145 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 239 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 149 bp overlap
SMARCB1 7 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 108 bp overlap
ChIP MCF-7 GSE123284.SMARCB1.MCF-7 79 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 194 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 123 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 312 bp overlap
ChIP MCF-7_JQ1 GSE123284.SMARCB1.MCF-7_JQ1 298 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 131 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 211 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 355 bp overlap
SOX2 6 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 230 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 209 bp overlap
ChIP KNS-62 GSE137459.SOX2.KNS-62 156 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 75 bp overlap
ChIP TT GSE46837.SOX2.TT 209 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 256 bp overlap
STAT3 4 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 83 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 58 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 225 bp overlap
ChIP MCF-7_jc5843 GSE126004.STAT3.MCF-7_jc5843 184 bp overlap
TARDBP 2 datasets
ChIP K-562 ENCSR429XTR.TARDBP.K-562 146 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 145 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 107 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 125 bp overlap
ChIP MCF-7_Veh GSE125594.TEAD4.MCF-7_Veh 99 bp overlap
TFAP2A 1 dataset
ChIP MCF-7 GSE60270.TFAP2A.MCF-7 54 bp overlap
TFAP2C 5 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 197 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 177 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 190 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 355 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 345 bp overlap
TLE3 1 dataset
ChIP MCF-7 GSE41561.TLE3.MCF-7 174 bp overlap
TP53 5 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 144 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 320 bp overlap
ChIP SaOS-2 GSE51268.TP53.SaOS-2 155 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 355 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 204 bp overlap
TP63 14 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 199 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 185 bp overlap
ChIP HaCaT_LacZ_TGFB GSE60814.TP63.HaCaT_LacZ_TGFB 112 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 168 bp overlap
ChIP HaCaT_dnRAS_TGFB GSE60814.TP63.HaCaT_dnRAS_TGFB 125 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 229 bp overlap
ChIP breast-organoid GSE113909.TP63.breast-organoid 121 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 156 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 153 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 355 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 355 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 209 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 169 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 98 bp overlap
TRPS1 1 dataset
ChIP T-47D GSE107013.TRPS1.T-47D 104 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 204 bp overlap
YY1 2 datasets
ChIP Ishikawa ENCFF505XQX 189 bp overlap
ChIP Ishikawa ENCSR000BSY.YY1.Ishikawa 93 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 184 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 279 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 248 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 355 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 355 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 127 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 146 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 315 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 355 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 123 bp overlap