chr1 : 97,567,096 – 97,567,635
539 bp 83 TFs 0 linked genes
This 539 bp open chromatin element has no linked target genes and is bound by 83 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:97,562,096 – 97,572,635
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 260 bp overlap
BCL6 2 datasets
Motif DE_60h DE_60h-BCL6_MA0463.3 13 bp overlap
Motif DE_72h DE_72h-BCL6_MA0463.3 13 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
Bach1::Mafk 5 datasets
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_60h DE_60h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_72h DE_72h-Bach1Mafk_MA0591.2 12 bp overlap
Motif DE_72h DE_72h-Bach1Mafk_MA0591.2 12 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 175 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 184 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
E2F7 2 datasets
Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap
Motif DE_72h DE_72h-E2F7_MA0758.1 14 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 348 bp overlap
ETV2::HOXB13 2 datasets
Motif DE_60h DE_60h-ETV2HOXB13_MA1943.2 13 bp overlap
Motif DE_72h DE_72h-ETV2HOXB13_MA1943.2 13 bp overlap
ETV5::DRGX 2 datasets
Motif DE_60h DE_60h-ETV5DRGX_MA1944.2 12 bp overlap
Motif DE_72h DE_72h-ETV5DRGX_MA1944.2 12 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 523 bp overlap
ChIP DE DE-FOXA2-2 501 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXS1 2 datasets
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
Foxl2 2 datasets
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 539 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 464 bp overlap
ChIP foregut GSE117136.GATA4.foregut 476 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 473 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 371 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 539 bp overlap
ChIP DE DE-GATA6-2 539 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 501 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 264 bp overlap
ChIP foregut GSE117136.GATA6.foregut 539 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 343 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 395 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 324 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 263 bp overlap
GMEB2 2 datasets
Motif DE_12h DE_12h-GMEB2_MA0862.1 8 bp overlap
Motif DE_60h DE_60h-GMEB2_MA0862.1 8 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gmeb1 2 datasets
Motif DE_12h DE_12h-Gmeb1_MA0615.2 6 bp overlap
Motif DE_60h DE_60h-Gmeb1_MA0615.2 6 bp overlap
HLF 1 dataset
Motif DE_72h DE_72h-HLF_MA0043.4 9 bp overlap
IKZF1 2 datasets
Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
INSM1 2 datasets
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
Motif DE_72h DE_72h-INSM1_MA0155.1 12 bp overlap
IRF2 2 datasets
Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
Irf1 2 datasets
Motif DE_60h DE_60h-Irf1_MA0050.4 11 bp overlap
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
JDP2 2 datasets
Motif DE_60h DE_60h-JDP2_MA0655.1 9 bp overlap
Motif DE_72h DE_72h-JDP2_MA0655.1 9 bp overlap
JUND 2 datasets
Motif DE_60h DE_60h-JUND_MA0491.3 9 bp overlap
Motif DE_72h DE_72h-JUND_MA0491.3 9 bp overlap
LIN54 2 datasets
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
Motif DE_72h DE_72h-LIN54_MA0619.2 7 bp overlap
Lef1 2 datasets
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
Lhx3 1 dataset
Motif DE_60h DE_60h-Lhx3_MA0135.2 12 bp overlap
MAF::NFE2 5 datasets
Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_60h DE_60h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_72h DE_72h-MAFNFE2_MA0501.2 11 bp overlap
Motif DE_72h DE_72h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 7 datasets
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_60h DE_60h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_72h DE_72h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_72h DE_72h-MAFGNFE2L1_MA0089.3 11 bp overlap
Motif DE_72h DE_72h-MAFGNFE2L1_MA0089.3 11 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
Motif DE_72h DE_72h-MEIS2_MA0774.1 8 bp overlap
MEIS3 2 datasets
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
Motif DE_72h DE_72h-MEIS3_MA0775.2 7 bp overlap
MSANTD3 2 datasets
Motif DE_60h DE_60h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_72h DE_72h-MSANTD3_MA1523.2 7 bp overlap
Mafb 1 dataset
Motif DE_60h DE_60h-Mafb_MA0117.3 11 bp overlap
Mafg 2 datasets
Motif DE_60h DE_60h-Mafg_MA0659.4 12 bp overlap
Motif DE_72h DE_72h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 179 bp overlap
NFE2 2 datasets
Motif DE_60h DE_60h-NFE2_MA0841.2 10 bp overlap
Motif DE_72h DE_72h-NFE2_MA0841.2 10 bp overlap
NKX2-2 2 datasets
Motif DE_60h DE_60h-NKX2-2_MA1645.2 8 bp overlap
Motif DE_72h DE_72h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 2 datasets
Motif DE_60h DE_60h-NKX2-5_MA0063.3 7 bp overlap
Motif DE_72h DE_72h-NKX2-5_MA0063.3 7 bp overlap
NR2F1 3 datasets
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
Motif DE_72h DE_72h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
Motif DE_72h DE_72h-NR2F6_MA1539.1 15 bp overlap
Nanog 2 datasets
Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap
Motif DE_72h DE_72h-Nanog_MA2339.1 7 bp overlap
Nfe2l2 4 datasets
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_72h DE_72h-Nfe2l2_MA0150.3 11 bp overlap
Motif DE_72h DE_72h-Nfe2l2_MA0150.3 11 bp overlap
Nr2f6 1 dataset
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
ONECUT1 2 datasets
Motif DE_60h DE_60h-ONECUT1_MA0679.3 9 bp overlap
Motif DE_72h DE_72h-ONECUT1_MA0679.3 9 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
PAX6 2 datasets
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
Motif DE_72h DE_72h-PAX6_MA0069.1 14 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 125 bp overlap
PGR 2 datasets
Motif DE_60h DE_60h-PGR_MA2327.1 9 bp overlap
Motif DE_72h DE_72h-PGR_MA2327.1 9 bp overlap
POU4F2 2 datasets
Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_60h DE_60h-POU4F3_MA0791.2 12 bp overlap
Motif DE_72h DE_72h-POU4F3_MA0791.2 12 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_72h DE_72h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm15 2 datasets
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
Motif DE_72h DE_72h-Prdm15_MA1616.2 11 bp overlap
RBPJ 2 datasets
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
Motif DE_72h DE_72h-RBPJ_MA1116.2 6 bp overlap
RFX5 1 dataset
ChIP IMR-90 ENCSR000EFD.RFX5.IMR-90 61 bp overlap
SATB1 2 datasets
Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap
Motif DE_72h DE_72h-SATB1_MA1963.2 7 bp overlap
SIX2 3 datasets
Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 181 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 143 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 477 bp overlap
SMARCA4 2 datasets
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 206 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 522 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 192 bp overlap
SMARCC1 3 datasets
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 167 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 441 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 209 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SPI1 1 dataset
ChIP DC_LPS GSE123347.SPI1.DC_LPS 138 bp overlap
SPIB 2 datasets
Motif DE_60h DE_60h-SPIB_MA0081.3 13 bp overlap
Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap
STAT1::STAT2 2 datasets
Motif DE_60h DE_60h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_72h DE_72h-STAT1STAT2_MA0517.2 13 bp overlap
Spi1 2 datasets
Motif DE_60h DE_60h-Spi1_MA0080.7 13 bp overlap
Motif DE_72h DE_72h-Spi1_MA0080.7 13 bp overlap
Stat2 4 datasets
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Motif DE_60h DE_60h-Stat2_MA1623.2 10 bp overlap
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
Motif DE_72h DE_72h-Stat2_MA1623.2 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 112 bp overlap
TCF7 2 datasets
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
THAP1 2 datasets
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
ZIM3 2 datasets
Motif DE_60h DE_60h-ZIM3_MA1709.2 11 bp overlap
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF140 2 datasets
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap
ZNF384 2 datasets
Motif DE_60h DE_60h-ZNF384_MA1125.2 8 bp overlap
Motif DE_72h DE_72h-ZNF384_MA1125.2 8 bp overlap
ZNF530 1 dataset
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
ZNF652 1 dataset
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZNF708 2 datasets
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
Motif DE_72h DE_72h-ZNF708_MA1730.2 9 bp overlap
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