chr4 : 123,406,954 123,407,163
209 bp 75 TFs 1 linked gene
This 209 bp open chromatin element is linked to SPRY1 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SPRY1 8.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:123,401,954 – 123,412,163
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF252VFI 91 bp overlap
AR 1 dataset
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 133 bp overlap
ARID2 3 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 185 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 209 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 178 bp overlap
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 209 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 76 bp overlap
BRD4 4 datasets
ChIP RH4 GSE83726.BRD4.RH4 196 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 209 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 209 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 159 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 105 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 139 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 209 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 196 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 209 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 178 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 209 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF740VZW 94 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 209 bp overlap
FOXA2 1 dataset
ChIP HepG2 ENCFF570ABM 192 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 209 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 208 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 209 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 209 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 178 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 141 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 122 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 209 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 154 bp overlap
MED1 2 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 209 bp overlap
ChIP RH4 GSE83726.MED1.RH4 167 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 209 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF176QIX 209 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 70 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 149 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 196 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 209 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 209 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 209 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 209 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 156 bp overlap
MYOG 4 datasets
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 205 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 201 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 172 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 155 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 167 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 170 bp overlap
POLR2A 2 datasets
ChIP HepG2 ENCFF736SLT 159 bp overlap
ChIP Panc1 ENCFF290KAB 209 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 209 bp overlap
ChIP HepG2 ENCFF508UTS 209 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 209 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 181 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 209 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 191 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 209 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 209 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 80 bp overlap
ChIP HepG2 ENCFF561IAJ 57 bp overlap
RBPJ 2 datasets
ChIP HepG2 ENCFF367CFI 209 bp overlap
ChIP HepG2 ENCFF367CFI 209 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 209 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 209 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 184 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 209 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 209 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 209 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 209 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 209 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCA4.TTC-1240_empty 209 bp overlap
SMARCC1 6 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 209 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 209 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 209 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 209 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 209 bp overlap
ChIP TTC-1240_empty GSE124903.SMARCC1.TTC-1240_empty 209 bp overlap
SNAI2 5 datasets
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 209 bp overlap
ChIP SMS-CTR GSE137168.SNAI2.SMS-CTR 209 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 209 bp overlap
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 189 bp overlap
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 209 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 209 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 116 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 209 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 209 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 209 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 167 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 209 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 209 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 209 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 139 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 110 bp overlap
ZGPAT 2 datasets
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 209 bp overlap
ChIP HepG2 ENCFF055YSO 209 bp overlap
ZNF121 3 datasets
ChIP Hep-G2 ENCSR945QEW.ZNF121.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF343YSL 209 bp overlap
ChIP WTC11 ENCFF291API 188 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 209 bp overlap
ZNF263 2 datasets
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 209 bp overlap
ChIP HepG2 ENCFF626SSV 96 bp overlap
ZNF362 1 dataset
ChIP HepG2 ENCFF256AZN 209 bp overlap
ZNF44 1 dataset
ChIP Hep-G2 ENCSR914HPP.ZNF44.Hep-G2 140 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 209 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 151 bp overlap