chr4 : 102,869,921 102,870,207
286 bp 69 TFs 2 linked genes
This 286 bp open chromatin element is linked to CISD2 and UBE2D3 and is bound by 69 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CISD2 948 bp At TSS Proximity
UBE2D3 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:102,864,921 – 102,875,207
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
69 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 53 bp overlap
ARID1A 2 datasets
ChIP Hep-G2 GSE69566.ARID1A.Hep-G2 197 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 114 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 108 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 94 bp overlap
ChIP K562 ENCFF291CXK 59 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 121 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 158 bp overlap
BRCA1 1 dataset
ChIP MCF-10A GSE40591.BRCA1.MCF-10A 82 bp overlap
BRD1 1 dataset
ChIP RKO GSE47190.BRD1.RKO 273 bp overlap
BRD4 6 datasets
ChIP K-562 ENCSR583ACG.BRD4.K-562 286 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 211 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 193 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 286 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 208 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 77 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 286 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 271 bp overlap
CUX1 2 datasets
ChIP K-562 ENCSR000EFO.CUX1.K-562 221 bp overlap
ChIP K562 ENCFF057AIX 286 bp overlap
DPF2 1 dataset
ChIP K562 ENCFF775HUO 109 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 176 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 137 bp overlap
ESR1 2 datasets
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 93 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 93 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 62 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 141 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 236 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 286 bp overlap
ChIP DE DE-FOXA2-2 286 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 266 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF885NMS 286 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE133072.GATA3.MCF-7 181 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 286 bp overlap
ChIP DE DE-GATA4-2 286 bp overlap
ChIP foregut GSE117136.GATA4.foregut 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 286 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 248 bp overlap
ChIP foregut GSE117136.GATA6.foregut 276 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 286 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 248 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 286 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 166 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 62 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 224 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 174 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 229 bp overlap
KLF6 2 datasets
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 54 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 212 bp overlap
KMT2A 7 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 286 bp overlap
ChIP HEK293T_C-term_shCtrl GSE90762.KMT2A.HEK293T_C-term_shCtrl 256 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 223 bp overlap
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 140 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 105 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 230 bp overlap
ChIP MV4-11 GSE83671.KMT2A.MV4-11 286 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 284 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 111 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 191 bp overlap
MEN1 2 datasets
ChIP MOLM-13 GSE149183.MEN1.MOLM-13 286 bp overlap
ChIP PC-3 GSE132827.MEN1.PC-3 235 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 83 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 225 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 286 bp overlap
MYBL2 1 dataset
ChIP HepG2 ENCFF176QIX 282 bp overlap
MYC 1 dataset
ChIP MIA-PaCa-2_CM GSE143804.MYC.MIA-PaCa-2_CM 54 bp overlap
NBN 2 datasets
ChIP GM12878 ENCSR278SQL.NBN.GM12878 169 bp overlap
ChIP K-562 ENCSR085QEV.NBN.K-562 208 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR657EOF.NFRKB.K-562 189 bp overlap
NONO 1 dataset
ChIP K562 ENCFF268WFF 64 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 199 bp overlap
NR2F2 1 dataset
ChIP HeLa GSE46237.NR2F2.HeLa 169 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 58 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 286 bp overlap
PHIP 4 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 286 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 286 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 286 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 226 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 140 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 149 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 92 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 139 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 186 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 64 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 255 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 179 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 236 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 180 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 157 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 286 bp overlap
SMARCB1 2 datasets
ChIP Hep-G2 GSE69566.SMARCB1.Hep-G2 218 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 123 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 127 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 101 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 243 bp overlap
THRB 2 datasets
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 59 bp overlap
ChIP HepG2 ENCFF476INC 103 bp overlap
TRPS1 2 datasets
ChIP MCF-7 GSE133072.TRPS1.MCF-7 286 bp overlap
ChIP T-47D GSE107013.TRPS1.T-47D 127 bp overlap
ZBTB8A 1 dataset
ChIP K562 ENCFF399HPQ 71 bp overlap
ZKSCAN2 1 dataset
ChIP HEK293T GSE78099.ZKSCAN2.HEK293T 255 bp overlap