chr3 : 167,483,776 – 167,484,554
778 bp 74 TFs 0 linked genes
This 778 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:167,478,776 – 167,489,554
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
ATF2 8 datasets
ChIP GM12878 ENCFF066HPG 329 bp overlap
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 294 bp overlap
ChIP HEK293 ENCFF194VKZ 125 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 298 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 333 bp overlap
ChIP HepG2 ENCFF955VER 261 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 294 bp overlap
ChIP K562 ENCFF139ZZG 334 bp overlap
ATF7 4 datasets
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 300 bp overlap
ChIP HepG2 ENCFF470FKK 319 bp overlap
ChIP MCF-7 ENCFF578WKB 191 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 321 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 96 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 257 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 222 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 333 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 387 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 366 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 239 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 327 bp overlap
Crx 2 datasets
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DPRX 3 datasets
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
DUX4 2 datasets
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
DUXA 2 datasets
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Motif DE_72h DE_72h-DUXA_MA0884.2 13 bp overlap
Dux 2 datasets
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 141 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 476 bp overlap
ChIP DE DE-FOXA2-2 375 bp overlap
FOXB1 2 datasets
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
GATA1::TAL1 2 datasets
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_72h DE_72h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 1 dataset
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 526 bp overlap
ChIP DE DE-GATA4-2 592 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 550 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 474 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 562 bp overlap
ChIP DE DE-GATA6-2 636 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 706 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 747 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 572 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 778 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 700 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 471 bp overlap
ChIP foregut GSE117136.GATA6.foregut 398 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 375 bp overlap
GSC 2 datasets
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 3 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Hnf1A 2 datasets
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Motif DE_72h DE_72h-Hnf1A_MA1991.2 10 bp overlap
Isl1 1 dataset
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 504 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 271 bp overlap
MAFF 1 dataset
Motif DE_60h DE_60h-MAFF_MA0495.4 11 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 275 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 389 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 99 bp overlap
MGA::EVX1 1 dataset
Motif DE_60h DE_60h-MGAEVX1_MA1960.2 11 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 265 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 376 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 165 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 214 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 241 bp overlap
NR3C1 1 dataset
ChIP MDA-MB-453 GSE152203.NR3C1.MDA-MB-453 165 bp overlap
OTX1 2 datasets
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 395 bp overlap
PAX6 1 dataset
Motif DE_60h DE_60h-PAX6_MA0069.1 14 bp overlap
PHOX2A 2 datasets
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_72h DE_72h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
PITX1 2 datasets
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU1F1 2 datasets
Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap
Motif DE_72h DE_72h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
Motif DE_72h DE_72h-POU2F1_MA0785.2 9 bp overlap
POU2F2 2 datasets
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
Motif DE_72h DE_72h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_60h DE_60h-POU2F3_MA0627.3 9 bp overlap
Motif DE_72h DE_72h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap
Motif DE_72h DE_72h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap
Motif DE_72h DE_72h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
Motif DE_72h DE_72h-POU3F4_MA0789.1 9 bp overlap
POU5F1 2 datasets
Motif DE_60h DE_60h-POU5F1_MA1115.2 7 bp overlap
Motif DE_72h DE_72h-POU5F1_MA1115.2 7 bp overlap
POU5F1B 2 datasets
Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap
Motif DE_72h DE_72h-POU5F1B_MA0792.1 9 bp overlap
PRDM9 2 datasets
Motif DE_60h DE_60h-PRDM9_MA1723.2 20 bp overlap
Motif DE_72h DE_72h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 2 datasets
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_72h DE_72h-PpargRxra_MA0065.3 13 bp overlap
RHOXF1 2 datasets
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 280 bp overlap
SMAD2 2 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 387 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 406 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 283 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 332 bp overlap
SP1 2 datasets
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SREBF1 2 datasets
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
Motif DE_72h DE_72h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
Motif DE_72h DE_72h-SREBF2_MA0596.1 10 bp overlap
TCF7L1 2 datasets
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_72h DE_72h-TCF7L2_MA0523.2 9 bp overlap
TRPS1 3 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Thap11 1 dataset
Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap
ZNF148 2 datasets
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF320 2 datasets
Motif DE_60h DE_60h-ZNF320_MA1976.2 20 bp overlap
Motif DE_72h DE_72h-ZNF320_MA1976.2 20 bp overlap
ZNF530 2 datasets
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF652 1 dataset
Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap
ZNF75D 2 datasets
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_72h DE_72h-ZNF75D_MA1601.2 12 bp overlap
ZNF816 2 datasets
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap
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