chr3 : 107,441,617 – 107,441,875

258 bp 78 TFs 0 linked genes

This 258 bp open chromatin element has no linked target genes and is bound by 78 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

78 transcription factors

ARID1B 2 datasets

ChIP K-562 ENCSR822CCM.ARID1B.K-562 258 bp overlap

ChIP K562 ENCFF938UXQ 258 bp overlap

ARNTL 1 dataset

ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 258 bp overlap

ATF1 1 dataset

ChIP K-562 ENCSR091GVJ.ATF1.K-562 152 bp overlap

ATF3 1 dataset

ChIP K-562 ENCSR028UIU.ATF3.K-562 106 bp overlap

BACH1 2 datasets

ChIP H1 ENCFF282VDB 180 bp overlap

ChIP WA01 ENCSR000EBQ.BACH1.WA01 194 bp overlap

BRD3 1 dataset

ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 81 bp overlap

BRD4 2 datasets

ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 240 bp overlap

ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 258 bp overlap

CC2D1A 1 dataset

ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 167 bp overlap

CHAMP1 2 datasets

ChIP K-562 ENCSR065XVO.CHAMP1.K-562 162 bp overlap

ChIP K-562 ENCSR315NNL.CHAMP1.K-562 55 bp overlap

CTCF 7 datasets

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

ChIP GSC23 GSE139416.CTCF.GSC23 88 bp overlap

ChIP endodermal cell ENCFF471YCZ 258 bp overlap

ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 163 bp overlap

ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 243 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 195 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 183 bp overlap

DPF2 1 dataset

ChIP K562 ENCFF775HUO 258 bp overlap

EHMT2 2 datasets

ChIP K-562 ENCSR175EOM.EHMT2.K-562 110 bp overlap

ChIP K562 ENCFF053BWO 169 bp overlap

EMSY 1 dataset

ChIP K562 ENCFF511ZZZ 258 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 169 bp overlap

EZH2 1 dataset

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap

GMEB1 1 dataset

ChIP K-562 ENCSR928KOR.GMEB1.K-562 258 bp overlap

HDGF 1 dataset

ChIP K-562 ENCSR563YDA.HDGF.K-562 76 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 189 bp overlap

JUN 1 dataset

ChIP HUES-8 GSE109524.JUN.HUES-8 175 bp overlap

MAFF 2 datasets

ChIP K-562 ENCSR000EGI.MAFF.K-562 126 bp overlap

ChIP K562 ENCFF071YKK 166 bp overlap

MAFG 2 datasets

ChIP K-562 ENCSR818DQV.MAFG.K-562 258 bp overlap

ChIP K562 ENCFF455EEO 155 bp overlap

MAFK 4 datasets

ChIP H1 ENCFF854XWE 178 bp overlap

ChIP K-562 ENCSR000EGX.MAFK.K-562 119 bp overlap

ChIP K562 ENCFF380WHM 156 bp overlap

ChIP WA01 ENCSR000EBS.MAFK.WA01 150 bp overlap

MAX 2 datasets

ChIP K-562 ENCSR000EFV.MAX.K-562 110 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 189 bp overlap

MED1 2 datasets

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 151 bp overlap

ChIP U-87MG GSE36354.MED1.U-87MG 161 bp overlap

MLLT1 1 dataset

ChIP K-562 ENCSR107GRP.MLLT1.K-562 92 bp overlap

MNT 1 dataset

ChIP K-562 ENCSR390VGH.MNT.K-562 159 bp overlap

MTA2 1 dataset

ChIP K-562 ENCSR113LAS.MTA2.K-562 128 bp overlap

MTA3 1 dataset

ChIP K-562 ENCSR180NCY.MTA3.K-562 256 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 218 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 258 bp overlap

NBN 1 dataset

ChIP K-562 ENCSR085QEV.NBN.K-562 124 bp overlap

NCOA2 1 dataset

ChIP K-562 ENCSR803EKW.NCOA2.K-562 155 bp overlap

NFE2 6 datasets

ChIP K-562 ENCSR552YGL.NFE2.K-562 258 bp overlap

ChIP K-562 ENCSR000FCC.NFE2.K-562 209 bp overlap

ChIP K562 ENCFF047YKA 142 bp overlap

ChIP K562 ENCFF163BSI 77 bp overlap

ChIP erythroid GSE125753.NFE2.erythroid 95 bp overlap

ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 150 bp overlap

NFE2L1 1 dataset

ChIP WTC11 ENCFF644BPU 215 bp overlap

NFE2L2 2 datasets

ChIP A-549 ENCSR584GHV.NFE2L2.A-549 112 bp overlap

ChIP K-562 ENCSR485GKE.NFE2L2.K-562 258 bp overlap

NFIA 1 dataset

ChIP K-562 GSE97661.NFIA.K-562 177 bp overlap

NFIC 2 datasets

ChIP K-562 ENCSR796ITY.NFIC.K-562 258 bp overlap

ChIP K562 ENCFF167YID 226 bp overlap

NUTM1 1 dataset

ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 258 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 204 bp overlap

PKNOX1 1 dataset

ChIP K-562 ENCSR115SMW.PKNOX1.K-562 238 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

POU4F2 1 dataset

Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 175 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 186 bp overlap

PPARG 1 dataset

ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 194 bp overlap

Prdm5 1 dataset

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SETDB1 1 dataset

ChIP K-562 ENCSR000EWD.SETDB1.K-562 66 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 162 bp overlap

SMARCA4 2 datasets

ChIP K-562 ENCSR587OQL.SMARCA4.K-562 180 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 258 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 258 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 258 bp overlap

SMARCE1 1 dataset

ChIP K-562 ENCSR157TCS.SMARCE1.K-562 51 bp overlap

SOX2 1 dataset

ChIP HNSC GSE69479.SOX2.HNSC 240 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 195 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 221 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 238 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

TRIM24 4 datasets

ChIP K-562 ENCSR907MZR.TRIM24.K-562 258 bp overlap

ChIP K-562 ENCSR957LDM.TRIM24.K-562 185 bp overlap

ChIP K562 ENCFF284DKY 203 bp overlap

ChIP K562 ENCFF616RIL 137 bp overlap

TRIM28 3 datasets

ChIP K-562 ENCSR474CVP.TRIM28.K-562 258 bp overlap

ChIP K-562 ENCSR000BRW.TRIM28.K-562 50 bp overlap

ChIP K562 ENCFF429WPG 226 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 181 bp overlap

Yy1 1 dataset

Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap

ZBTB33 1 dataset

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 76 bp overlap

ZEB2 1 dataset

ChIP K-562 ENCSR322CFO.ZEB2.K-562 193 bp overlap

ZFP36 1 dataset

ChIP K-562 ENCSR776CYN.ZFP36.K-562 58 bp overlap

ZFP69B 1 dataset

ChIP HEK293T GSE78099.ZFP69B.HEK293T 147 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF24 1 dataset

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF316 3 datasets

ChIP K-562 ENCSR200JYP.ZNF316.K-562 258 bp overlap

ChIP K562 ENCFF281INV 229 bp overlap

ChIP K562 ENCFF838QCD 230 bp overlap

ZNF317 4 datasets

ChIP HEK293 GSE76494.ZNF317.HEK293 245 bp overlap

ChIP HEK293T GSE78099.ZNF317.HEK293T 118 bp overlap

ChIP K562 ENCFF896LCF 158 bp overlap

ChIP WTC11 ENCFF537KXI 163 bp overlap

ZNF320 1 dataset

ChIP HEK293 GSE76494.ZNF320.HEK293 87 bp overlap

ZNF592 1 dataset

ChIP K-562 ENCSR249BHQ.ZNF592.K-562 258 bp overlap

ZNF639 2 datasets

ChIP K-562 ENCSR949NVY.ZNF639.K-562 184 bp overlap

ChIP K562 ENCFF267NLX 229 bp overlap

ZNF70 1 dataset

ChIP SK-N-SH ENCFF833ACX 101 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap