chr3 : 68,632,237 68,632,482
245 bp 88 TFs 1 linked gene
This 245 bp open chromatin element is linked to PSMC1P1 and is bound by 88 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PSMC1P1 3.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:68,627,237 – 68,637,482
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 245 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 245 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 245 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 170 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 190 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 242 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 178 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 179 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 245 bp overlap
CHD7 5 datasets
ChIP H1 ENCFF126NLU 245 bp overlap
ChIP H1 ENCFF126NLU 245 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 216 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 245 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 245 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCFF432ZEW 245 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 245 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 232 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 245 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 213 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 146 bp overlap
GLIS2 1 dataset
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
ChIP H9_plus GSE109562.GLIS3.H9_plus 245 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 245 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 169 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 152 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
Irf1 2 datasets
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 245 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 245 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 245 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 245 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 245 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 245 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 185 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 239 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 245 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 245 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 152 bp overlap
ChIP H1 ENCFF747ZPQ 184 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 245 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 245 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 245 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 245 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 245 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 245 bp overlap
ChIP hESC GSE20650.NANOG.hESC 245 bp overlap
ChIP hESC GSE18292.NANOG.hESC 195 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 195 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU5F1 8 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 245 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 245 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 245 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 188 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 245 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 177 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 236 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 64 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 245 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 173 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 245 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 213 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 245 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 203 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 213 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 166 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 154 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 245 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 245 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 242 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 245 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 245 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 245 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 245 bp overlap
SOX2 7 datasets
ChIP HNSC GSE69479.SOX2.HNSC 245 bp overlap
ChIP hESC GSE69479.SOX2.hESC 228 bp overlap
ChIP hESC GSE18292.SOX2.hESC 111 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 245 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 217 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 196 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 206 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 245 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 245 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 141 bp overlap
Stat6 1 dataset
Motif DE_12h DE_12h-Stat6_MA0520.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 245 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 189 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 245 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 212 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 245 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 245 bp overlap
ChIP H1 ENCFF778PAX 193 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 201 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 245 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 206 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 181 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 245 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap