chr2 : 182,824,261 182,825,327
1,066 bp 114 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 114 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:182,819,261 – 182,830,327
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
ASCL1 5 datasets
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 144 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 172 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 150 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 348 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 80 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 256 bp overlap
EHF 1 dataset
Motif DE_60h DE_60h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_60h DE_60h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_60h DE_60h-ELF3_MA0640.3 9 bp overlap
ELK4 1 dataset
Motif DE_60h DE_60h-ELK4_MA0076.3 9 bp overlap
ESR1 2 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 241 bp overlap
ChIP breast-cancer_3840 GSE126004.ESR1.breast-cancer_3840 163 bp overlap
ETV1 1 dataset
Motif DE_60h DE_60h-ETV1_MA0761.3 9 bp overlap
Erg 1 dataset
Motif DE_60h DE_60h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA1 15 datasets
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 302 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 208 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 227 bp overlap
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 183 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 209 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 134 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 206 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 157 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 196 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 102 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 200 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 562 bp overlap
FOXA2 7 datasets
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 448 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 105 bp overlap
ChIP DE DE-FOXA2-1 1057 bp overlap
ChIP DE DE-FOXA2-2 1066 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP pancreas_CARN1618 ERP008682.FOXA2.pancreas_CARN1618 242 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 486 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXS1 1 dataset
Motif DE_60h DE_60h-FOXS1_MA2118.1 8 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GABPA 1 dataset
Motif DE_60h DE_60h-GABPA_MA0062.4 10 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 961 bp overlap
ChIP DE DE-GATA4-2 1040 bp overlap
ChIP foregut GSE117136.GATA4.foregut 768 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 1005 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 1043 bp overlap
GATA6 12 datasets
ChIP AGS GSE51705.GATA6.AGS 197 bp overlap
ChIP DE DE-GATA6-1 804 bp overlap
ChIP DE DE-GATA6-2 948 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 573 bp overlap
ChIP H9 ERP004206.GATA6.H9 299 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 151 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 124 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 544 bp overlap
ChIP foregut GSE117136.GATA6.foregut 524 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 631 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 572 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 688 bp overlap
Gli1 1 dataset
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 358 bp overlap
Hic1 2 datasets
Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap
Motif DE_60h DE_60h-Hic1_MA0739.2 8 bp overlap
Hmga1 1 dataset
Motif DE_60h DE_60h-Hmga1_MA2124.1 8 bp overlap
IKZF2 1 dataset
Motif DE_60h DE_60h-IKZF2_MA2326.1 6 bp overlap
INSM1 1 dataset
Motif DE_60h DE_60h-INSM1_MA0155.1 12 bp overlap
Ikzf3 1 dataset
Motif DE_60h DE_60h-Ikzf3_MA1992.2 9 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 362 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 674 bp overlap
MAFF 3 datasets
ChIP HepG2 ENCFF452YUT 122 bp overlap
ChIP K-562 ENCSR000EGI.MAFF.K-562 58 bp overlap
ChIP K562 ENCFF071YKK 106 bp overlap
MAFK 3 datasets
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 65 bp overlap
ChIP HepG2 ENCFF743ZOF 124 bp overlap
ChIP HepG2 ENCFF767LDG 122 bp overlap
MEIS1 3 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MSC 1 dataset
Motif DE_60h DE_60h-MSC_MA0665.1 10 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 327 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 444 bp overlap
MYCN 2 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 217 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 227 bp overlap
MYF5 1 dataset
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
MYF6 2 datasets
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
MYOD1 3 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 267 bp overlap
MYOG 1 dataset
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
NANOG 1 dataset
ChIP LNCaP_pNanog1_Dox GSE74799.NANOG.LNCaP_pNanog1_Dox 160 bp overlap
NHLH1 1 dataset
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 187 bp overlap
NR1D1 1 dataset
Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 227 bp overlap
OSR1 1 dataset
Motif DE_60h DE_60h-OSR1_MA1542.2 8 bp overlap
OSR2 2 datasets
Motif DE_60h DE_60h-OSR2_MA1646.2 8 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 250 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PDX1 6 datasets
ChIP H9 ERP004206.PDX1.H9 245 bp overlap
ChIP hESC GSE58685.PDX1.hESC 230 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 460 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 525 bp overlap
ChIP islet ERP001456.PDX1.islet 257 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 647 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 446 bp overlap
POLR2A 3 datasets
ChIP stomach ENCFF820WZN 345 bp overlap
ChIP transverse colon ENCFF607LKE 187 bp overlap
ChIP transverse colon ENCFF610RWV 425 bp overlap
POU2F1 1 dataset
Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap
POU3F4 1 dataset
Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap
PPARG 2 datasets
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 274 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 445 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 220 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 569 bp overlap
SMARCA4 1 dataset
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 957 bp overlap
SNAI2 1 dataset
Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX15 1 dataset
Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 591 bp overlap
SOX18 1 dataset
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
SOX8 1 dataset
Motif DE_60h DE_60h-SOX8_MA0868.3 7 bp overlap
SOX9 2 datasets
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
ChIP HT29 GSE63629.SOX9.HT29 240 bp overlap
SRY 1 dataset
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
Six3 1 dataset
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
Sox17 1 dataset
Motif DE_60h DE_60h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_60h DE_60h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 274 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 273 bp overlap
TBX19 1 dataset
Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap
TBXT 1 dataset
Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap
TEAD1 2 datasets
Motif DE_60h DE_60h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 356 bp overlap
TFAP2A 1 dataset
Motif DE_60h DE_60h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif DE_60h DE_60h-TFAP2C_MA0814.3 9 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 714 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 268 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 619 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 714 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif DE_60h DE_60h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
USF2 1 dataset
ChIP K-562 GSE111469.USF2.K-562 172 bp overlap
ZBTB11 1 dataset
Motif DE_60h DE_60h-ZBTB11_MA2329.1 9 bp overlap
ZBTB6 1 dataset
Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap
ZBTB7A 1 dataset
Motif DE_60h DE_60h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZFP42 1 dataset
Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap
ZNF135 1 dataset
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF140 1 dataset
Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 201 bp overlap
ZNF148 1 dataset
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
ZNF213 1 dataset
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
ZNF281 1 dataset
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
ZNF331 1 dataset
Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap
ZNF382 1 dataset
Motif DE_60h DE_60h-ZNF382_MA1594.1 24 bp overlap
ZNF708 1 dataset
Motif DE_60h DE_60h-ZNF708_MA1730.2 9 bp overlap
Zfx 1 dataset
Motif DE_60h DE_60h-Zfx_MA0146.3 10 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap