chr2 : 161,243,921 – 161,244,284
363 bp 59 TFs 1 linked gene
This 363 bp open chromatin element is linked to LINC01806 and is bound by 59 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LINC01806 453 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:161,238,921 – 161,249,284
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ATF4 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 338 bp overlap
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 229 bp overlap
BCL6 2 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 205 bp overlap
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 165 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 320 bp overlap
BRD2 10 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 239 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 343 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 217 bp overlap
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 299 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 227 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 198 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 198 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 88 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 88 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 311 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 130 bp overlap
BRD4 23 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 200 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 111 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 222 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 363 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 212 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 330 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 363 bp overlap
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 241 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 206 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 51 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 363 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 73 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 73 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 83 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 83 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 363 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 162 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 68 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 218 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 265 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 247 bp overlap
ChIP T-cell_DMSO GSE138084.BRD4.T-cell_DMSO 102 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 77 bp overlap
CBX2 2 datasets
ChIP HepG2 ENCFF838BNI 282 bp overlap
ChIP HepG2 ENCFF838BNI 282 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE50622.CDK7.Jurkat 363 bp overlap
ChIP Jurkat GSE83777.CDK7.Jurkat 92 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 51 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
CREBBP 3 datasets
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 239 bp overlap
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 363 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 306 bp overlap
CTCF 1 dataset
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 53 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 220 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 363 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 273 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 315 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 352 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 271 bp overlap
EZH2 3 datasets
ChIP GM23338 ENCFF613YON 230 bp overlap
ChIP OCI-Ly1 GSE45982.EZH2.OCI-Ly1 112 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 75 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 363 bp overlap
HDAC2 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 126 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 286 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 125 bp overlap
ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 363 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 209 bp overlap
ChIP SHI-1 GSE95511.KMT2A.SHI-1 231 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 363 bp overlap
MAX 1 dataset
ChIP P493-6_4HR GSE125863.MAX.P493-6_4HR 151 bp overlap
MED1 3 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 267 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 363 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 66 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 363 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 109 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 159 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 151 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 177 bp overlap
MYC 2 datasets
ChIP GP5D GSE51234.MYC.GP5D 354 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 124 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 234 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 363 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 282 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 363 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 298 bp overlap
PAX8 1 dataset
ChIP GM12878 ENCFF033MGF 202 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 363 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 363 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 152 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 81 bp overlap
REPIN1 1 dataset
ChIP HepG2 ENCFF598VSY 363 bp overlap
RNF2 4 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 274 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 363 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 363 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 66 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 122 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 363 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 273 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 169 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 234 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 257 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 257 bp overlap
SNAPC5 1 dataset
ChIP HepG2 ENCFF853IKB 188 bp overlap
SPI1 2 datasets
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 289 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 338 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 285 bp overlap
SUPT5H 4 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 53 bp overlap
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 226 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 180 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 363 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 122 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 280 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 207 bp overlap
VDR 1 dataset
ChIP LS180_125 GSE31939.VDR.LS180_125 174 bp overlap
YY1 4 datasets
ChIP ALL GSE145549.YY1.ALL 363 bp overlap
ChIP GM12878 ENCFF908JTL 285 bp overlap
ChIP GM12891 ENCSR000BKJ.YY1.GM12891 117 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 297 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 193 bp overlap
ZBTB11 1 dataset
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 145 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 57 bp overlap
ChIP MCF-7 ENCSR318LVG.ZBTB40.MCF-7 53 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 244 bp overlap
ZNF24 3 datasets
ChIP GM12878 ENCFF688STO 341 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 334 bp overlap
ChIP MCF-7 ENCSR503VTG.ZNF24.MCF-7 202 bp overlap
ZNF275 1 dataset
ChIP HepG2 ENCFF015JKD 77 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 285 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 247 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 275 bp overlap
Huangfu Lab · Publications · Resources · Contact