chr2 : 127,480,320 127,480,690
370 bp 72 TFs 0 linked genes
This 370 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:127,475,320 – 127,485,690
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 174 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 366 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 138 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 173 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 153 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 186 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 129 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 206 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 337 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 263 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 76 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 125 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 155 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 51 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 245 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 165 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 105 bp overlap
ChIP HCT-116 GSE62890.HNF4A.HCT-116 168 bp overlap
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 119 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 123 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 215 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 222 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 370 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 370 bp overlap
JUND 2 datasets
ChIP WA01 ENCSR000BKP.JUND.WA01 103 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 151 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 120 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 206 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 117 bp overlap
ChIP H1 ENCFF747ZPQ 222 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 370 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 338 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 181 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 327 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 311 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 269 bp overlap
ChIP hESC GSE18292.NANOG.hESC 104 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 236 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 226 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 144 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 201 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 249 bp overlap
POLR2A 11 datasets
ChIP GM12892 ENCFF245LYF 66 bp overlap
ChIP GM23338 ENCFF450WCS 106 bp overlap
ChIP GM23338 ENCFF450WCS 350 bp overlap
ChIP H1 ENCFF566JSR 362 bp overlap
ChIP H1 ENCFF566JSR 370 bp overlap
ChIP H1 ENCFF833NJP 250 bp overlap
ChIP HepG2 ENCFF718XAJ 245 bp overlap
ChIP K562 ENCFF214YGX 323 bp overlap
ChIP K562 ENCFF262YXJ 274 bp overlap
ChIP spleen ENCFF044PYR 254 bp overlap
ChIP transverse colon ENCFF607LKE 294 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 224 bp overlap
ChIP HepG2 ENCFF508UTS 221 bp overlap
POU1F1 1 dataset
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F2 2 datasets
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 106 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 291 bp overlap
POU5F1 7 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 364 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 370 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 119 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 335 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 123 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 314 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 237 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 296 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 140 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 317 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 278 bp overlap
ChIP HepG2 ENCFF292RVQ 364 bp overlap
ChIP HepG2 ENCFF561IAJ 197 bp overlap
RFX1 1 dataset
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX3 1 dataset
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 237 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 138 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 109 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 359 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 370 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 370 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 201 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 180 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 104 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 139 bp overlap
SOX2 6 datasets
ChIP HNSC GSE69479.SOX2.HNSC 351 bp overlap
ChIP NPC GSE122631.SOX2.NPC 193 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 370 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 278 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 204 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 248 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 178 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 134 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 257 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 207 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 186 bp overlap
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 131 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 370 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 304 bp overlap
ChIP H1 ENCFF778PAX 188 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 152 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 128 bp overlap
ZNF143 2 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 109 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 224 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap