chr2 : 106,165,151 – 106,165,395
244 bp 77 TFs 0 linked genes
This 244 bp open chromatin element has no linked target genes and is bound by 77 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:106,160,151 – 106,170,395
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 244 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 133 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 189 bp overlap
BRD4 1 dataset
ChIP SW480 GSE110473.BRD4.SW480 185 bp overlap
CDK9 1 dataset
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 152 bp overlap
CEBPD 1 dataset
Motif ES_0h ES_0h-CEBPD_MA0836.3 8 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 176 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 227 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 163 bp overlap
CTCF 88 datasets
ChIP A-549 ENCSR000DPF.CTCF.A-549 143 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 239 bp overlap
ChIP A549 ENCFF034FVO 227 bp overlap
ChIP A673 ENCFF123WOM 244 bp overlap
ChIP CUTLL1 GSE115893.CTCF.CUTLL1 227 bp overlap
ChIP CUTLL1_GSI GSE130140.CTCF.CUTLL1_GSI 189 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 140 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 169 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 220 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 161 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 216 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 133 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 149 bp overlap
ChIP GM12873 ENCFF711LOS 244 bp overlap
ChIP GM23338 ENCFF531QOI 107 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP GM23338 ENCFF832KWE 244 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 241 bp overlap
ChIP H9 ENCFF152GTF 244 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 244 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 186 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 193 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 244 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 170 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 187 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 160 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 108 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 75 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 138 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 75 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF194VBQ 238 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 229 bp overlap
ChIP T-cell GSE115893.CTCF.T-cell 244 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 151 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 137 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 174 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 244 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 244 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 244 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 244 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 163 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 130 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 244 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 244 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 199 bp overlap
ChIP chondrocyte ENCFF134ORZ 244 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 239 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 128 bp overlap
ChIP endodermal cell ENCFF471YCZ 244 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 216 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 176 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 225 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 119 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 241 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 208 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 217 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 200 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 244 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 244 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 228 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 163 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 209 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 198 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 228 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 165 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 182 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 177 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 169 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 217 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 244 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 137 bp overlap
ChIP neural crest cell ENCFF182LWK 244 bp overlap
ChIP neural progenitor cell ENCFF420RBO 220 bp overlap
ChIP neural progenitor cell ENCFF581WPG 244 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 244 bp overlap
ChIP osteoblast ENCFF491ZJZ 244 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 244 bp overlap
ChIP osteocyte ENCFF929FPD 244 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 126 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 220 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 235 bp overlap
ChIP smooth muscle cell ENCFF656FBT 244 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 237 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 217 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 165 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 189 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 209 bp overlap
ESR1 2 datasets
Motif ES_0h ES_0h-ESR1_MA0112.4 15 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 185 bp overlap
ESR2 1 dataset
Motif ES_0h ES_0h-ESR2_MA0258.2 15 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 123 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 70 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 188 bp overlap
GLI3 1 dataset
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 244 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 212 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 176 bp overlap
HIC2 2 datasets
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HNF4A 1 dataset
Motif ES_0h ES_0h-HNF4A_MA1494.2 14 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 109 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 228 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 209 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 244 bp overlap
JUNB 1 dataset
ChIP CD4 GSE116695.JUNB.CD4 145 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 76 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 198 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 180 bp overlap
KLF9 1 dataset
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
KMT2A 4 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 199 bp overlap
ChIP L826 GSE83671.KMT2A.L826 136 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 240 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 174 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 176 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 244 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 157 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 2 datasets
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 233 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 190 bp overlap
MYC 2 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 111 bp overlap
ChIP Jurkat GSE83777.MYC.Jurkat 157 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 206 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 77 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 244 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 244 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 244 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 137 bp overlap
ChIP hESC GSE18292.NANOG.hESC 244 bp overlap
ChIP hESC GSE20650.NANOG.hESC 204 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 212 bp overlap
NR1H2::RXRA 1 dataset
Motif ES_0h ES_0h-NR1H2RXRA_MA0115.1 17 bp overlap
NR2C2 1 dataset
Motif ES_0h ES_0h-NR2C2_MA0504.2 14 bp overlap
NR2F1 1 dataset
Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap
NR4A1 1 dataset
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
Nr2F6 1 dataset
Motif ES_0h ES_0h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif ES_0h ES_0h-Nr2f6_MA0677.2 13 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 126 bp overlap
POU5F1 7 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 217 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 244 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 119 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 157 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 202 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 244 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 71 bp overlap
PPARD 1 dataset
Motif ES_0h ES_0h-PPARD_MA1550.2 14 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 232 bp overlap
Pparg::Rxra 1 dataset
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 205 bp overlap
ChIP H1 ENCFF967OJF 225 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 141 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 203 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 244 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 244 bp overlap
RXRB 1 dataset
Motif ES_0h ES_0h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif ES_0h ES_0h-RXRG_MA0856.1 14 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0859.2 15 bp overlap
Rxra 1 dataset
Motif ES_0h ES_0h-Rxra_MA0512.2 14 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 159 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 193 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 158 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 107 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 169 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 244 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 231 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 244 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 204 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 244 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 82 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 150 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 227 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 244 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 125 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 244 bp overlap
SOX4 1 dataset
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 244 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 244 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 237 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 3 datasets
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 244 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 230 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
THRB 1 dataset
Motif ES_0h ES_0h-THRB_MA1574.2 13 bp overlap
TP63 1 dataset
ChIP HaCaT_dnRAS_TGFB GSE60814.TP63.HaCaT_dnRAS_TGFB 141 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 216 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 177 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 180 bp overlap
ZNF143 2 datasets
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 146 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 244 bp overlap
ZNF214 1 dataset
Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 236 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 150 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
Zic2 1 dataset
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
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