chr2 : 33,013,691 33,014,121
430 bp 75 TFs 0 linked genes
This 430 bp open chromatin element has no linked target genes and is bound by 75 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:33,008,691 – 33,019,121
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 106 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 118 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 110 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 132 bp overlap
BRD4 2 datasets
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 180 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 256 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 430 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 430 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 348 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 327 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 172 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 52 bp overlap
ChIP MCF-7 ENCFF282FWZ 272 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 217 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 225 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 232 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 129 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 169 bp overlap
FOXA1 5 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 229 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 323 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 430 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 287 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 255 bp overlap
FOXA2 10 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 420 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 293 bp overlap
ChIP BJ1-hTERT_MimoRelease GSE92491.FOXA2.BJ1-hTERT_MimoRelease 250 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 188 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 360 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 296 bp overlap
ChIP DE DE-FOXA2-1 400 bp overlap
ChIP DE DE-FOXA2-2 413 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 265 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 302 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 95 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 81 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 126 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 296 bp overlap
ChIP DE DE-GATA4-2 242 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 430 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 394 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 251 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 237 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 255 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 169 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 363 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 137 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 86 bp overlap
HDAC2 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 149 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 281 bp overlap
HOXB13 1 dataset
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 178 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 347 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 283 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 335 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 69 bp overlap
ChIP SK-N-SH ENCFF285GEQ 218 bp overlap
JUNB 2 datasets
ChIP A549 ENCFF251BPG 200 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 113 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 117 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap
MED1 2 datasets
ChIP G296S GSE85628.MED1.G296S 113 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 113 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 282 bp overlap
MZF1 3 datasets
ChIP HEK293 ENCFF683ZWN 400 bp overlap
ChIP HEK293 ENCFF683ZWN 241 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 420 bp overlap
NR3C1 2 datasets
ChIP IMR-90 ERP007093.NR3C1.IMR-90 163 bp overlap
ChIP IMR-90_GLUCC ERP007081.NR3C1.IMR-90_GLUCC 79 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 145 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 300 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 152 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 175 bp overlap
PGR 3 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 185 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 212 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 281 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 249 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 404 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 122 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 244 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 354 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 187 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 268 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 398 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 246 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 71 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 65 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 175 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 228 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 194 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 273 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 430 bp overlap
SMARCA4 18 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 193 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 171 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 190 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 98 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 135 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 130 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 89 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 170 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 90 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 91 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 290 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 285 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 200 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 336 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 231 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 297 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 282 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 351 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 222 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 106 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 176 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH ENCFF449PID 218 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 289 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 388 bp overlap
TBX5 2 datasets
ChIP G296S GSE85628.TBX5.G296S 413 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 413 bp overlap
TEAD4 3 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 123 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 155 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 123 bp overlap
TP53 1 dataset
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 291 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 186 bp overlap
TRIM28 3 datasets
ChIP HEK293 ENCFF265CEM 430 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 256 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 256 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 195 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 155 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 233 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 430 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 319 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 262 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 210 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 290 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 317 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 140 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 108 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 346 bp overlap
ZNF680 3 datasets
ChIP HEK293 ENCFF418WHE 312 bp overlap
ChIP HEK293 ENCSR307CKC.ZNF680.HEK293 264 bp overlap
ChIP HEK293 GSE76494.ZNF680.HEK293 230 bp overlap